DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-I and RAM1

DIOPT Version :9

Sequence 1:NP_525100.2 Gene:betaggt-I / 33704 FlyBaseID:FBgn0015000 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_010193.1 Gene:RAM1 / 851468 SGDID:S000002248 Length:431 Species:Saccharomyces cerevisiae


Alignment Length:359 Identity:106/359 - (29%)
Similarity:160/359 - (44%) Gaps:68/359 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EDRTDTEPVLLSKHAKNLL--RFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQD 64
            :|..:.||.|..:..|..|  .|...||.:|.:.|.::..::::....|.|::. ..:....::.
Yeast    69 DDEKNIEPALTKEFHKMYLDVAFEISLPPQMTALDASQPWMLYWIANSLKVMDR-DWLSDDTKRK 132

  Fly    65 IIDWIY-----GGLVVPRDNEKNCGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVLV 124
            |:|.::     ||         ..||..|                    |..|||.||.::..| 
Yeast   133 IVDKLFTISPSGG---------PFGGGPG--------------------QLSHLASTYAAINAL- 167

  Fly   125 TLGDDL----SRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFVYCAATICYMLDYWGDVNKE 185
            :|.|::    .|:|||.|...:.::::|.|.|..|::..|.|.|.:|||.:|..:|:...:...|
Yeast   168 SLCDNIDGCWDRIDRKGIYQWLISLKEPNGGFKTCLEVGEVDTRGIYCALSIATLLNILTEELTE 232

  Fly   186 TMFQFITRSLRYDYGF-SQELEGEAHGGTTFCALAALHLSGQLHRLDATTVERMKRWLIFRQMD- 248
            .:..::.....|:.|| |.....|||||.||||.|:|.:   |..:|...||::..|...||:. 
Yeast   233 GVLNYLKNCQNYEGGFGSCPHVDEAHGGYTFCATASLAI---LRSMDQINVEKLLEWSSARQLQE 294

  Fly   249 --GFQGRPNKPVDTCYSFWIGASLCILDGF---------ELTDYARNREFILSTQDKLIGGFAKW 302
              ||.||.||.||.|||||:|.|..||:.|         .|.||     .:...|:|...|....
Yeast   295 ERGFCGRSNKLVDGCYSFWVGGSAAILEAFGYGQCFNKHALRDY-----ILYCCQEKEQPGLRDK 354

  Fly   303 PQATPDPFHTYLGLCGLA-----FTGEPGLSPVN 331
            |.|..|.:||...|.|||     ::..|..||.|
Yeast   355 PGAHSDFYHTNYCLLGLAVAESSYSCTPNDSPHN 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-INP_525100.2 CAL1 10..336 CDD:227362 103/351 (29%)
GGTase-I 14..321 CDD:239225 98/335 (29%)
RAM1NP_010193.1 FTase 80..374 CDD:239223 98/332 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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