DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-I and RGTB1

DIOPT Version :10

Sequence 1:NP_525100.2 Gene:betaggt-I / 33704 FlyBaseID:FBgn0015000 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_568259.1 Gene:RGTB1 / 831094 AraportID:AT5G12210 Length:321 Species:Arabidopsis thaliana


Alignment Length:354 Identity:103/354 - (29%)
Similarity:159/354 - (44%) Gaps:58/354 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDRTDTEPVLL--SKHAKNLLRFLNLLPARMASH-----DNTRSTIVFFAVCGLDVLNSLHLVP 58
            |...:.::.|.|  .||    :|::.:...:..|.     |:.|....::.:..||:|:.|..|.
plant     1 MSSTSSSQMVQLVADKH----VRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVS 61

  Fly    59 PQLRQDIIDWIYGGLVVPRDNEKNCGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVL 123
               .:::|.|:       ...:...|||.|.....|                 |:..|.:::.:|
plant    62 ---EEEVISWL-------MTCQHESGGFAGNTGHDP-----------------HILYTLSAVQIL 99

  Fly   124 VTLGDDLSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFVY---CAATICYMLDYWGDVNKE 185
             .|.|.::.||...:...||.:|..:||||..:.| |.|.||.|   |..:|...||   .:|.|
plant   100 -ALFDKINILDIGKVSSYVAKLQNEDGSFSGDMWG-EIDTRFSYIAICCLSILKCLD---KINVE 159

  Fly   186 TMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLHRLDATTVERMKRWLIFRQM--D 248
            ...::|......|.||......|:|.|..||.:.||.::|.||.:|.   :.:..||..||:  .
plant   160 KAVKYIVSCKNLDGGFGCTPGAESHAGQIFCCVGALAITGSLHHVDK---DSLGWWLCERQLKAG 221

  Fly   249 GFQGRPNKPVDTCYSFWIGASLCILDGFELTDYARNREFILSTQDKLIGGFAKWPQATPDPFHTY 313
            |..|||.|..|.|||:|:.:||.::|.....|.|:..:|||..||...||.:..|:...|.||||
plant   222 GLNGRPEKLADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQDLDNGGISDRPEDAVDIFHTY 286

  Fly   314 LGLCGLAFTGEPGLSPVNPSLNMSMAAYA 342
            .|:.||:....||:..::|       |||
plant   287 FGVAGLSLLEYPGVKVIDP-------AYA 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-INP_525100.2 GGTase-I 14..321 CDD:239225 94/316 (30%)
RGTB1NP_568259.1 PLN03201 5..320 CDD:215630 102/350 (29%)

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