DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-I and Pggt1b

DIOPT Version :10

Sequence 1:NP_525100.2 Gene:betaggt-I / 33704 FlyBaseID:FBgn0015000 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_112344.1 Gene:Pggt1b / 81746 RGDID:621754 Length:377 Species:Rattus norvegicus


Alignment Length:361 Identity:161/361 - (44%)
Similarity:236/361 - (65%) Gaps:9/361 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLSKHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWIYGGLVV 75
            |..:|.:...|.|.:||.|.:|.:.:|.||.|||:.|||:|:||.:|.   :.|||:|||...|:
  Rat    21 LRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVVN---KDDIIEWIYSLQVL 82

  Fly    76 PRDNEKN---CGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVLVTLGDDLSRLDRKS 137
            |.::..|   | ||.|...:......::.......|..||:|||||.|:.|:.|||||||:|:::
  Rat    83 PTEDRSNLDRC-GFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTGLSCLIILGDDLSRVDKEA 146

  Fly   138 IVDGVAAVQKPEGSFSACIDGSEDDMRFVYCAATICYMLDYWGDVNKETMFQFITRSLRYDYGFS 202
            .:.|:.|:|..:|||.|..:|||:||||||||:.|||||:.|..::.:....:|.||:.||.|.:
  Rat   147 CLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLA 211

  Fly   203 QELEGEAHGGTTFCALAALHLSGQLHRL-DATTVERMKRWLIFRQMDGFQGRPNKPVDTCYSFWI 266
            |....|:|||:|||.:|:|.|.|:|..: ....:.|:|||.|.||.:|:.||||||||||||||:
  Rat   212 QGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWV 276

  Fly   267 GASLCILDGFELTDYARNREFILSTQDKLIGGFAKWPQATPDPFHTYLGLCGLAFTGEPGLSPVN 331
            ||:|.:|..|:.|::.:||.:||||||:|:|||||||.:.||..|.|.|:|||:...|.|:..|:
  Rat   277 GATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEESGICKVH 341

  Fly   332 PSLNMSMAAYAHLQHLHEQWRSADGRG-DEDISVSS 366
            |:||:|......|:.||:.|::.|.:. .:::.:||
  Rat   342 PALNVSTRTSERLRDLHQSWKTKDSKQCSDNVHISS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-INP_525100.2 GGTase-I 14..321 CDD:239225 146/310 (47%)
Pggt1bNP_112344.1 GGTase-I 22..332 CDD:239225 146/313 (47%)
PFTB 1. /evidence=ECO:0000255 144..186 22/41 (54%)
PFTB 2. /evidence=ECO:0000255 193..234 17/40 (43%)
PFTB 3. /evidence=ECO:0000255 245..284 25/38 (66%)
PFTB 4. /evidence=ECO:0000255 291..333 24/41 (59%)

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