DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-I and RABGGTB

DIOPT Version :10

Sequence 1:NP_525100.2 Gene:betaggt-I / 33704 FlyBaseID:FBgn0015000 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_004573.2 Gene:RABGGTB / 5876 HGNCID:9796 Length:331 Species:Homo sapiens


Alignment Length:344 Identity:103/344 - (29%)
Similarity:161/344 - (46%) Gaps:59/344 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRTDTEPVLLSKHAKNLLRFLNLLPARMASH------------DNTRSTIVFFAVCGLDVLNSLH 55
            |..||  :||.|||..:           ||:            :..|.:.:::.:..:|::..||
Human    13 DAPDT--LLLEKHADYI-----------ASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLH 64

  Fly    56 LVPPQLRQDIIDWIYGGLVVPRDNEKNCGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSL 120
            .:.   |::|:.:|       :..:..|||........|                 ||..|.:::
Human    65 RMN---REEILAFI-------KSCQHECGGISASIGHDP-----------------HLLYTLSAV 102

  Fly   121 AVLVTLGDDLSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFVYCAATICYMLDYWGDVNKE 185
            .:| ||.|.::.:|...:|:.|..:||.:|||:..|.| |.|.||.:||.....:|.....:|.|
Human   103 QIL-TLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWG-EIDTRFSFCAVATLALLGKLDAINVE 165

  Fly   186 TMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLHRLDATTVERMKRWLIFRQM--D 248
            ...:|:...:.:|.||......|:|.|..:|....|.::.|||::::   :.:..||..||:  .
Human   166 KAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNS---DLLGWWLCERQLPSG 227

  Fly   249 GFQGRPNKPVDTCYSFWIGASLCILDGFELTDYARNREFILSTQDKLIGGFAKWPQATPDPFHTY 313
            |..|||.|..|.|||:|:.|||.|:......|..:.|.|||:.||:..||||..|....|||||.
Human   228 GLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTL 292

  Fly   314 LGLCGLAFTGEPGLSPVNP 332
            .|:.||:..||..:.||||
Human   293 FGIAGLSLLGEEQIKPVNP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-INP_525100.2 GGTase-I 14..321 CDD:239225 92/320 (29%)
RABGGTBNP_004573.2 GGTase-II 18..301 CDD:239224 94/325 (29%)
PFTB 1 20..61 8/51 (16%)
PFTB 2 68..109 13/65 (20%)
PFTB 3 116..157 15/41 (37%)
PFTB 4 164..205 10/40 (25%)
PFTB 5 212..253 18/43 (42%)
PFTB 6 260..302 19/41 (46%)

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