DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-I and pggt1b

DIOPT Version :9

Sequence 1:NP_525100.2 Gene:betaggt-I / 33704 FlyBaseID:FBgn0015000 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001008137.1 Gene:pggt1b / 493499 XenbaseID:XB-GENE-975346 Length:372 Species:Xenopus tropicalis


Alignment Length:355 Identity:163/355 - (45%)
Similarity:235/355 - (66%) Gaps:8/355 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLSKHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWIYGGLVV 75
            |..:|.:...|.|.|||.:.||.:..|.||.|||:.|||:|:||:::.   :.:||:|||...|:
 Frog    16 LPDRHVRYFQRSLQLLPEQCASLETNRLTIAFFALSGLDMLDSLNVIN---KSEIIEWIYSLQVL 77

  Fly    76 PRDNEKN---CGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVLVTLGDDLSRLDRKS 137
            |.:::.|   | ||.|...:......::.......:..||:|||||::|.|:.|||||||:::::
 Frog    78 PTEDKSNLDRC-GFRGSSCLGLPFNPSKGHGLYHPHDSGHIAMTYTAIASLLILGDDLSRVNKEA 141

  Fly   138 IVDGVAAVQKPEGSFSACIDGSEDDMRFVYCAATICYMLDYWGDVNKETMFQFITRSLRYDYGFS 202
            .:.|:.|:|.|:|||.|..:|||:|||||||||.|||||:.|..::.|....:|.||:.|:....
 Frog   142 CLAGLRALQLPDGSFCAVPEGSENDMRFVYCAACICYMLNDWSGMDMERSIDYIRRSMSYENALG 206

  Fly   203 QELEGEAHGGTTFCALAALHLSGQLHRL-DATTVERMKRWLIFRQMDGFQGRPNKPVDTCYSFWI 266
            |....|||||:|||.:|:|.|.|:|..: ....:.|:.||.:.||.:||.||||||||||||||:
 Frog   207 QGAGLEAHGGSTFCGIASLCLMGKLEEVFSEKELNRIGRWCLMRQQNGFHGRPNKPVDTCYSFWV 271

  Fly   267 GASLCILDGFELTDYARNREFILSTQDKLIGGFAKWPQATPDPFHTYLGLCGLAFTGEPGLSPVN 331
            ||:|.:||.|:.|::.:||.|||||||:::|||||||.:.||..|.|.|:|||:..||.|:..|:
 Frog   272 GATLMLLDIFKYTNFEKNRNFILSTQDRIVGGFAKWPDSHPDALHAYFGICGLSLIGEAGICEVH 336

  Fly   332 PSLNMSMAAYAHLQHLHEQWRSADGRGDED 361
            |:||:|:..|..||.||:.|:|.|...:.|
 Frog   337 PALNVSLTTYKRLQQLHDTWKSKDCERNSD 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-INP_525100.2 CAL1 10..336 CDD:227362 152/328 (46%)
GGTase-I 14..321 CDD:239225 145/310 (47%)
pggt1bNP_001008137.1 GGTase-I 18..327 CDD:239225 145/312 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 40 1.000 Domainoid score I12355
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3685
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 1 1.000 - - FOG0005480
OrthoInspector 1 1.000 - - oto102354
Panther 1 1.100 - - LDO PTHR11774
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4430
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.020

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