DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-I and rabggtb

DIOPT Version :10

Sequence 1:NP_525100.2 Gene:betaggt-I / 33704 FlyBaseID:FBgn0015000 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_998277.2 Gene:rabggtb / 406386 ZFINID:ZDB-GENE-040426-2116 Length:331 Species:Danio rerio


Alignment Length:341 Identity:98/341 - (28%)
Similarity:163/341 - (47%) Gaps:45/341 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TDTEPVLLSKHAKNLL---RFLNLLPARMASHDNTRSTI--------VFFAVCGLDVLNSLHLVP 58
            |..:.|.:...|.|.|   :..:.:.|..:..|:...|:        :::.:..:|::..|..:.
Zfish     3 TQVKDVTIKPDAPNTLFLDKHADYIAAYGSKKDDYEYTLSEYLRMSGIYWGLTVMDLMGQLSRMN 67

  Fly    59 PQLRQDIIDWIYGGLVVPRDNEKNCGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVL 123
               |::||::|       :..:.:|||........|                 ||..|.:::.:|
Zfish    68 ---REEIIEFI-------KSCQHDCGGISASIGHDP-----------------HLLYTLSAIQIL 105

  Fly   124 VTLGDDLSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFVYCAATICYMLDYWGDVNKETMF 188
             :|.|.::.:|...:|:.|..:|:.:|||:....| |.|.||.:||.....:|.....:|.:...
Zfish   106 -SLYDSVNAIDVDKVVEYVKGLQQEDGSFAGDKWG-EIDTRFSFCAVATLALLGKLDVINVDKAV 168

  Fly   189 QFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLHRLDATTVERMKRWLIFRQM--DGFQ 251
            :|:...:.:|.||......|:|.|..:|....|.::||||:::|   :.:..||..||:  .|..
Zfish   169 EFVMSCMNFDGGFGCRPGSESHAGQIYCCTGFLSVTGQLHQVNA---DLLGWWLCERQLPSGGLN 230

  Fly   252 GRPNKPVDTCYSFWIGASLCILDGFELTDYARNREFILSTQDKLIGGFAKWPQATPDPFHTYLGL 316
            |||.|..|.|||:|:.|||.|:......|.|:.|.|||:.||:..||||..|....|||||..|:
Zfish   231 GRPEKLPDVCYSWWVLASLKIIGRIHWIDKAKLRNFILACQDEETGGFADRPGDMVDPFHTLFGV 295

  Fly   317 CGLAFTGEPGLSPVNP 332
            .||:..|:..:.||||
Zfish   296 AGLSLLGDEQIKPVNP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-INP_525100.2 GGTase-I 14..321 CDD:239225 91/319 (29%)
rabggtbNP_998277.2 GGTase-II 18..301 CDD:239224 89/314 (28%)

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