DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaggt-I and FNTB

DIOPT Version :9

Sequence 1:NP_525100.2 Gene:betaggt-I / 33704 FlyBaseID:FBgn0015000 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_002019.1 Gene:FNTB / 2342 HGNCID:3785 Length:437 Species:Homo sapiens


Alignment Length:357 Identity:95/357 - (26%)
Similarity:152/357 - (42%) Gaps:64/357 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWIYGGLVVPRD 78
            ||...|.|.|..|.......|.:|..:.::      :|:||.|:...:.|.:...:...|.:.:.
Human    77 KHFHYLKRGLRQLTDAYECLDASRPWLCYW------ILHSLELLDEPIPQIVATDVCQFLELCQS 135

  Fly    79 NEKNCGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVLVTLGDD--LSRLDRKSIVDG 141
            .|...||..|                    |:.|||.||.::..|..:|.:  ...::|:.::..
Human   136 PEGGFGGGPG--------------------QYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQY 180

  Fly   142 VAAVQKPEGSFSACIDGSEDDMRFVYCAATICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELE 206
            :.::::|:|||...: |.|.|:|..||||::..:.:.......|...::|.|...::.|......
Human   181 LYSLKQPDGSFLMHV-GGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPG 244

  Fly   207 GEAHGGTTFCALAALHLSGQLHRLDATTVERMKRWLIFRQM---DGFQGRPNKPVDTCYSFWIGA 268
            .|||||.|||.||||.:   |.|..:..::.:.:|:..|||   .|||||.||.||.|||||...
Human   245 MEAHGGYTFCGLAALVI---LKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAG 306

  Fly   269 SLCIL---------DGFELTDYARN----REFILSTQDKLIGGFAKWPQATPDPFHTYLGLCGLA 320
            .|.:|         ....::.:..:    :|:||.......||....|..:.|.:||...|.||:
Human   307 LLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLS 371

  Fly   321 FT--------------GEP--GLSPVNPSLNM 336
            ..              |.|  .|.|.:|..|:
Human   372 IAQHFGSGAMLHDVVLGVPENALQPTHPVYNI 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-INP_525100.2 CAL1 10..336 CDD:227362 94/355 (26%)
GGTase-I 14..321 CDD:239225 89/324 (27%)
FNTBNP_002019.1 FTase 75..373 CDD:239223 89/325 (27%)
PFTB 1 123..164 12/60 (20%)
PFTB 2 174..215 13/41 (32%)
PFTB 3 222..263 16/43 (37%)
Farnesyl diphosphate binding. /evidence=ECO:0000269|PubMed:11687658, ECO:0000269|PubMed:12036349, ECO:0000269|PubMed:12825937, ECO:0000269|PubMed:15451670, ECO:0000269|PubMed:16893176 248..251 2/2 (100%)
PFTB 4 270..312 19/41 (46%)
Farnesyl diphosphate binding. /evidence=ECO:0000269|PubMed:11687658, ECO:0000269|PubMed:12036349, ECO:0000269|PubMed:12825937, ECO:0000269|PubMed:15451670, ECO:0000269|PubMed:16893176 291..294 1/2 (50%)
Farnesyl diphosphate binding. /evidence=ECO:0000269|PubMed:11687658, ECO:0000269|PubMed:12036349, ECO:0000269|PubMed:12825937, ECO:0000269|PubMed:15451670, ECO:0000269|PubMed:16893176 300..303 2/2 (100%)
PFTB 5 332..374 12/41 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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