DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-I and Pggt1b

DIOPT Version :9

Sequence 1:NP_525100.2 Gene:betaggt-I / 33704 FlyBaseID:FBgn0015000 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_766215.1 Gene:Pggt1b / 225467 MGIID:1917514 Length:377 Species:Mus musculus


Alignment Length:359 Identity:161/359 - (44%)
Similarity:229/359 - (63%) Gaps:16/359 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLSKHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWIYGGLVV 75
            |..:|.:...|.|.:||.|.:|.:.:|.||.|||:.|||:|:||.:|.   :.|||:|||...|:
Mouse    21 LRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVVN---KDDIIEWIYSLQVL 82

  Fly    76 P---RDNEKNCG----GFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVLVTLGDDLSRL 133
            |   |.|...||    .::|......|...|     ...|..||:|||||.|:.|:.|||||.|:
Mouse    83 PTEDRSNLSRCGFRGSSYLGIPFNPSKNPGA-----AHPYDSGHIAMTYTGLSCLIILGDDLGRV 142

  Fly   134 DRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFVYCAATICYMLDYWGDVNKETMFQFITRSLRYD 198
            |:::.:.|:.|:|..:|||.|..:|||:||||||||:.|||||:.|..::.:....:|.||:.||
Mouse   143 DKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYD 207

  Fly   199 YGFSQELEGEAHGGTTFCALAALHLSGQLHRL-DATTVERMKRWLIFRQMDGFQGRPNKPVDTCY 262
            .|.:|....|:|||:|||.:|:|.|.|:|..: ....:.|:|||.|.||.:|:.|||||||||||
Mouse   208 NGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQQNGYHGRPNKPVDTCY 272

  Fly   263 SFWIGASLCILDGFELTDYARNREFILSTQDKLIGGFAKWPQATPDPFHTYLGLCGLAFTGEPGL 327
            |||:||:|.:|..|:.|::.:||.:||||||:|:|||||||.:.||..|.|.|:|||:...|.|:
Mouse   273 SFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEESGI 337

  Fly   328 SPVNPSLNMSMAAYAHLQHLHEQWRSADGRGDED 361
            ..|:|:||:|......|:.||:.|::.|.:...|
Mouse   338 CKVHPALNVSTRTSERLRDLHQSWKTKDSKQCSD 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-INP_525100.2 CAL1 10..336 CDD:227362 153/332 (46%)
GGTase-I 14..321 CDD:239225 147/314 (47%)
Pggt1bNP_766215.1 CAL1 21..360 CDD:227362 158/346 (46%)
GGTase-I 22..332 CDD:239225 147/317 (46%)
PFTB 1 144..186 22/41 (54%)
PFTB 2 193..234 17/40 (43%)
Geranylgeranyl diphosphate binding. /evidence=ECO:0000250|UniProtKB:P53610 219..221 1/1 (100%)
PFTB 3 245..284 25/38 (66%)
Geranylgeranyl diphosphate binding. /evidence=ECO:0000250|UniProtKB:P53610 263..266 2/2 (100%)
Geranylgeranyl diphosphate binding. /evidence=ECO:0000250|UniProtKB:P53610 272..275 2/2 (100%)
PFTB 4 291..333 24/41 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830967
Domainoid 1 1.000 84 1.000 Domainoid score I8312
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3685
Inparanoid 1 1.050 322 1.000 Inparanoid score I2493
Isobase 1 0.950 - 0 Normalized mean entropy S1849
OMA 1 1.010 - - QHG54575
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 1 1.000 - - FOG0005480
OrthoInspector 1 1.000 - - oto92047
orthoMCL 1 0.900 - - OOG6_103705
Panther 1 1.100 - - LDO PTHR11774
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R918
SonicParanoid 1 1.000 - - X4430
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.890

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