DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL24 and AT5G23535

DIOPT Version :10

Sequence 1:NP_523476.1 Gene:mRpL24 / 33703 FlyBaseID:FBgn0031651 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_680212.1 Gene:AT5G23535 / 832419 AraportID:AT5G23535 Length:159 Species:Arabidopsis thaliana


Alignment Length:146 Identity:54/146 - (36%)
Similarity:75/146 - (51%) Gaps:7/146 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 IEDWSFFRGDRIEVLVGKDKGKQGIVTQVIPERNWVIVEGLNWHYRKVGGEKEFPGIIIKSEAPL 143
            |..|...|||.:.::.|||||:.|.:.:||..:|.|||||.|...:.:.|..:..|.|...||||
plant    10 IRHWKILRGDNVMIIRGKDKGETGTIKRVIRSQNRVIVEGKNLIKKHIKGGPDHEGGIFTVEAPL 74

  Fly   144 HVTKDIRLVDPSDLQGTDFEWRFTEEGEKVRVSL---RSGRIIPIPETNNQTHDYKTPNAYIERE 205
            |.: ::::|||...:......::.|:|.||||:.   .||.|||.||.   .....||.......
plant    75 HAS-NVQVVDPVTGRPCKVGVKYLEDGTKVRVARGTGTSGSIIPRPEI---LKIRATPRPTTAGP 135

  Fly   206 KDTPGAVVGEITFQPK 221
            ||||...|.|.|:..|
plant   136 KDTPMEFVWEQTYDAK 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL24NP_523476.1 RplX 86..183 CDD:439968 37/99 (37%)
AT5G23535NP_680212.1 RplX 14..110 CDD:439968 35/96 (36%)

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