DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL24 and AT3G49910

DIOPT Version :10

Sequence 1:NP_523476.1 Gene:mRpL24 / 33703 FlyBaseID:FBgn0031651 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_190560.1 Gene:AT3G49910 / 824153 AraportID:AT3G49910 Length:146 Species:Arabidopsis thaliana


Alignment Length:100 Identity:28/100 - (28%)
Similarity:45/100 - (45%) Gaps:18/100 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 INYLPR-TVERKRFR---YTTNRSWTGQFRQQNMPGTVRRKVLVE--PIEDWSFFRGDRIEVLVG 95
            :.|.|| |..|::.|   :|.:.|.........:...:|:|..|.  ||.     :.|.::::.|
plant     1 MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIR-----KDDEVQIVRG 60

  Fly    96 KDKGKQGIVTQVIPERNWVIVEGLNWHYRKVGGEK 130
            ..||::|.|.||. .|.|||      |..::..||
plant    61 TYKGREGKVVQVY-RRKWVI------HIERITREK 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL24NP_523476.1 RplX 86..183 CDD:439968 14/44 (32%)
AT3G49910NP_190560.1 Ribosomal_L26 8..121 CDD:465307 24/92 (26%)

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