DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL24 and Mrpl24

DIOPT Version :9

Sequence 1:NP_523476.1 Gene:mRpL24 / 33703 FlyBaseID:FBgn0031651 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_080867.2 Gene:Mrpl24 / 67707 MGIID:1914957 Length:216 Species:Mus musculus


Alignment Length:201 Identity:99/201 - (49%)
Similarity:129/201 - (64%) Gaps:5/201 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 FRYTTNRSWTGQFRQQNMPGTVRRKVLVEPI--EDWSFFRGDRIEVLVGKDKGKQGIVTQVIPER 111
            :||..:|..:...:::|.|.:.||.|:||||  |||..|.||.:|:|.|||.||||.|.||:.:|
Mouse    19 YRYGMSRPGSIADKRKNPPWSRRRPVVVEPISDEDWHLFCGDMVEILEGKDAGKQGKVVQVVRQR 83

  Fly   112 NWVIVEGLNWHYRKVGGEKEFPGIIIKSEAPLHVTKDIRLVDPSDLQGTDFEWRFTEEGEKVRVS 176
            |||::||||.|||.:|..|:..|.:|.||||| :...::||||.|.:.|:.:|||||.||:||||
Mouse    84 NWVVLEGLNTHYRYIGRTKDHRGTMIASEAPL-LHHQVKLVDPVDRKPTEIQWRFTEAGERVRVS 147

  Fly   177 LRSGRIIPIPETNNQTHDYKTPNAYIEREKDTPGAVVGEITFQPKLSTFEMDIMEEMGIKEERTP 241
            .|||||||.||....  |...|..:.:..|||......|.|:.|:|.|.|.|:||.|||:|.|..
Mouse   148 TRSGRIIPKPEFPRA--DGIVPETWTDGPKDTSVEDALERTYVPRLKTLEEDVMEAMGIQETRRF 210

  Fly   242 VKSYWY 247
            .|.|||
Mouse   211 KKVYWY 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL24NP_523476.1 rplX 86..183 CDD:234566 55/96 (57%)
Mrpl24NP_080867.2 KOW 59..154 CDD:381967 55/95 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839271
Domainoid 1 1.000 61 1.000 Domainoid score I10474
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12241
Inparanoid 1 1.050 182 1.000 Inparanoid score I3963
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52435
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004182
OrthoInspector 1 1.000 - - oto94786
orthoMCL 1 0.900 - - OOG6_101141
Panther 1 1.100 - - LDO PTHR12903
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2757
SonicParanoid 1 1.000 - - X5232
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.890

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