DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL24 and mrpl24

DIOPT Version :9

Sequence 1:NP_523476.1 Gene:mRpL24 / 33703 FlyBaseID:FBgn0031651 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_001002401.1 Gene:mrpl24 / 436674 ZFINID:ZDB-GENE-040718-98 Length:216 Species:Danio rerio


Alignment Length:201 Identity:108/201 - (53%)
Similarity:134/201 - (66%) Gaps:5/201 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 FRYTTNRSWTGQFRQQNMPGTVRRKVLVEPI--EDWSFFRGDRIEVLVGKDKGKQGIVTQVIPER 111
            :||.|||.||...|:.|.||..||||.||||  |||...|||.:|||.||:|||||.|.|||..|
Zfish    19 YRYGTNRPWTIAARRLNPPGKRRRKVFVEPIANEDWPVVRGDTVEVLSGKEKGKQGKVAQVIRAR 83

  Fly   112 NWVIVEGLNWHYRKVGGEKEFPGIIIKSEAPLHVTKDIRLVDPSDLQGTDFEWRFTEEGEKVRVS 176
            ||||:||||.|||.||...::.|..:.||||| :.|||.|:||:|.:.|:.:||:|||||:||||
Zfish    84 NWVILEGLNTHYRYVGRSGDYRGTYLASEAPL-LLKDIALIDPTDRKPTEIQWRYTEEGERVRVS 147

  Fly   177 LRSGRIIPIPETNNQTHDYKTPNAYIEREKDTPGAVVGEITFQPKLSTFEMDIMEEMGIKEERTP 241
            :|:|||||.|..  |..|...|..:.:..|||......:.|:.|.|.|.|.::||:|.|:|.|.|
Zfish   148 VRTGRIIPKPVF--QRKDGIVPQQWKDGPKDTSPEDTLQKTYTPSLKTLEEEVMEKMNIQENRRP 210

  Fly   242 VKSYWY 247
            .|||||
Zfish   211 RKSYWY 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL24NP_523476.1 rplX 86..183 CDD:234566 59/96 (61%)
mrpl24NP_001002401.1 rplX 56..154 CDD:234566 59/98 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..186 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583271
Domainoid 1 1.000 65 1.000 Domainoid score I10079
eggNOG 1 0.900 - - E1_COG0198
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12241
Inparanoid 1 1.050 203 1.000 Inparanoid score I3714
OMA 1 1.010 - - QHG52435
OrthoDB 1 1.010 - - D1007373at2759
OrthoFinder 1 1.000 - - FOG0004182
OrthoInspector 1 1.000 - - oto41742
orthoMCL 1 0.900 - - OOG6_101141
Panther 1 1.100 - - LDO PTHR12903
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2757
SonicParanoid 1 1.000 - - X5232
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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