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Protein Alignment mRpL24 and mrpl40
DIOPT Version :9
Sequence 1: | NP_523476.1 |
Gene: | mRpL24 / 33703 |
FlyBaseID: | FBgn0031651 |
Length: | 247 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_593870.1 |
Gene: | mrpl40 / 2543447 |
PomBaseID: | SPAC4F8.02c |
Length: | 279 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 174 |
Identity: | 47/174 - (27%) |
Similarity: | 70/174 - (40%) |
Gaps: | 54/174 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 82 WSFFRGDRIEVLVGKDKGKQGIVTQVIPERNWVIVEGLNWHYRKV--------GGEKEFPGIIIK 138
|..|:||.:.|..|..|||.|.|.:.....|.:.:||:|....|| ..:.:.|.|.|.
pombe 66 WHIFKGDYVYVHQGPLKGKWGRVVETNKYTNGITIEGVNVRSVKVPIFLLRNKPEDNQDPVIDIA 130
Fly 139 SEAPLHVTKDIRLVDPSDLQGTDFEWRFTEEGEKVRV----------SLRSGRII---------- 183
.| :|.. ::||:..:. |:.||.|.: :||| ||
pombe 131 HE--VHYA-NVRLLAHAK----------TDAGEPVLIPVKLKKHSSTNLRS--IIRPNIEGVQIH 180
Fly 184 ----PIPETNNQTHDYKTPNAYIEREKDTPGAVVGEITFQPKLS 223
|.|:|.::..| | |.:.||...||.::|:.|.||
pombe 181 TIHLPRPKTEDKPKD---P----EGKLDTKNPVVSKVTWSPSLS 217
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
mRpL24 | NP_523476.1 |
rplX |
86..183 |
CDD:234566 |
29/114 (25%) |
mrpl40 | NP_593870.1 |
RplX |
64..>152 |
CDD:223276 |
27/98 (28%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0004182 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101141 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR12903 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.000 |
|
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