DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpL24 and rpl26

DIOPT Version :9

Sequence 1:NP_523476.1 Gene:mRpL24 / 33703 FlyBaseID:FBgn0031651 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_595654.1 Gene:rpl26 / 2540274 PomBaseID:SPBC29B5.03c Length:126 Species:Schizosaccharomyces pombe


Alignment Length:116 Identity:31/116 - (26%)
Similarity:49/116 - (42%) Gaps:27/116 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 NRSWTGQFRQQ-----NMPGTVRRKVLVEP----------IEDWSFFRGDRIEVLVGKDKGKQGI 103
            :|..|...|:|     ..|.:|||.::..|          |......|.|:|.|:.|.:||::|.
pombe     4 SRDVTSSRRKQRKAHFGAPSSVRRVLMSAPLSKELREQYKIRSLPVRRDDQITVIRGSNKGREGK 68

  Fly   104 VTQVIPERNWVIVEGLNWHYRKVGGEKEFPGI------IIKSEAPLHVTKD 148
            :|.|..::..:::|.:.  ..|..|.....||      |.|    ||:.||
pombe    69 ITSVYRKKFLLLIERVT--REKANGASAPVGIDASKVVITK----LHLDKD 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL24NP_523476.1 rplX 86..183 CDD:234566 21/69 (30%)
rpl26NP_595654.1 Ribosomal_L26 8..121 CDD:293511 30/112 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0198
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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