DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL24 and mrpl-24

DIOPT Version :9

Sequence 1:NP_523476.1 Gene:mRpL24 / 33703 FlyBaseID:FBgn0031651 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_491613.1 Gene:mrpl-24 / 172204 WormBaseID:WBGene00019076 Length:278 Species:Caenorhabditis elegans


Alignment Length:267 Identity:102/267 - (38%)
Similarity:146/267 - (54%) Gaps:45/267 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NLPKEYIERSKKQV----------------YWQTPKEINYLP---RTVERKRFRYTTNRS---WT 58
            ::|..|:||:|:.|                |:..|.:  |:|   |..|.|:.....:||   ::
 Worm    22 HMPSAYVERTKRTVPRKVFGDRFGAPDIKMYYVHPDD--YVPSHRRPWEDKQISSHLHRSDKYFS 84

  Fly    59 GQFRQQ--NMPGTVRRKVLVEPIED--WSFFRGDRIEVLVGKDKGKQGIVTQVIPERNWVIVEGL 119
            .|...|  |:     |:...|.:.|  |:||.||.::|:||||||:||:|.....:.:.|||:||
 Worm    85 AQLSNQYFNL-----RRPKSERMADTEWTFFPGDLVQVMVGKDKGRQGLVLTTSRDSSDVIVDGL 144

  Fly   120 NWHYRKVGGEKEFP---GI---IIKSEAPLHVT-KDIRLVDPSDLQGTDFEWRFTEEG-EKVRVS 176
               :.|:|.:.|..   |:   :...|.||.|: |.:.||||:|.|..:..|:....| |.:|||
 Worm   145 ---HTKLGEDMEGSEKLGVDKTLRWQEQPLSVSKKQVMLVDPNDEQPCEARWQLNGPGDEYIRVS 206

  Fly   177 LRSGRIIPIPETNNQTHDYKTPNAYIERE-KDTPGAVVGEITFQPKLSTFEMDIMEEMGIKEERT 240
            .|||..||||.....|::|..|..|||.| ||||...|.|.|:.||:::||.:||||||||||||
 Worm   207 TRSGYEIPIPSQAKVTYEYLQPENYIEVEGKDTPADAVLERTYMPKVASFEQEIMEEMGIKEERT 271

  Fly   241 PVKSYWY 247
            |..::||
 Worm   272 PKPTFWY 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL24NP_523476.1 rplX 86..183 CDD:234566 41/104 (39%)
mrpl-24NP_491613.1 KOW_RPL26 112..180 CDD:240513 26/70 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160595
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0198
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12241
Inparanoid 1 1.050 138 1.000 Inparanoid score I3101
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52435
OrthoDB 1 1.010 - - D1007373at2759
OrthoFinder 1 1.000 - - FOG0004182
OrthoInspector 1 1.000 - - oto18225
orthoMCL 1 0.900 - - OOG6_101141
Panther 1 1.100 - - LDO PTHR12903
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2757
SonicParanoid 1 1.000 - - X5232
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.800

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