DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment synr and cil-7

DIOPT Version :10

Sequence 1:NP_608879.1 Gene:synr / 33702 FlyBaseID:FBgn0031650 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_491493.2 Gene:cil-7 / 172121 WormBaseID:WBGene00021017 Length:548 Species:Caenorhabditis elegans


Alignment Length:369 Identity:66/369 - (17%)
Similarity:151/369 - (40%) Gaps:65/369 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VVEQYVRLDEQISKLEGTCPGPRMATAEAWVEHIQSKHEAMLGLDGMGVSPLREREWETEEALPI 97
            ||:.|:.:::.|::||......:..:...:.:::::..|.:..:       |:|.:.:||.    
 Worm    77 VVQDYINIEKAINRLERKNVLKKFESQTIYADNLKNTVEQLEAV-------LKELKKQTER---- 130

  Fly    98 PAYTMGGRQGDPIVANTPTKDLAQLAYNLGVIGDARKASMHEDFFANLSESAMYLLSIRYYGEML 162
                          ..|..|::.|.:    |....::....:|.:  |.|.|.|           
 Worm   131 --------------EKTDLKNIEQPS----VRDYLKQQGQWDDRY--LKEKAEY----------- 164

  Fly   163 EHTKVRLKT-----------------LAESYAE----LNELYVKQDGIIAYISGGTYMTRLEESI 206
            |...||.:|                 :.|.|.:    ||.||.:||.::..|.|..|.:..|..:
 Worm   165 EDAMVRQETVQKELNIARVNYDNAVKIQEIYKQQTDNLNALYEEQDKMLEAIFGTDYASEKENVL 229

  Fly   207 DEQLETARDTRDKLGSALEQWRICGLLLRAAANSSTQALKQWRQLGRIIDPKQKLQW--ALDCRS 269
            :.:::...|.:.::..|:.:|....:||..|....|..:.:|:.:.:|....::.::  |.:.|:
 Worm   230 EGEVDDMVDWQQRVSLAMFKWANGRVLLVHALTQLTFGINRWQDVQKIEKENERGRYFAAAEARN 294

  Fly   270 LLHASTISLEAAQLALPHVELKYMSHRQVLAVKHCNTYLITDIANKARYEHTSRVFTSYESNMSK 334
            ...|:..::::.::.|..|:..|.:.:::..::........::.|.:..:...:||...:..::.
 Worm   295 NFVAAAQNVQSCRMYLNKVDFPYGTEKEIALLEDTVNKAFRNVDNDSEMKKALKVFQETQQKVAA 359

  Fly   335 TCTWLYETFNSTLRPDYDRAEETVCGLAKTLRDHREEVFNTVRK 378
            ...|..:..|.|:|.|.|:|...:....|.||:.|..:...:.|
 Worm   360 LIQWFDKVINDTIRKDLDQANNELIKKQKALREERLTLMKKLAK 403

Return to query results.
Submit another query.