DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgs1 and LOC799643

DIOPT Version :9

Sequence 1:NP_523475.3 Gene:Sgs1 / 33701 FlyBaseID:FBgn0003372 Length:1286 Species:Drosophila melanogaster
Sequence 2:XP_017211382.2 Gene:LOC799643 / 799643 -ID:- Length:1044 Species:Danio rerio


Alignment Length:948 Identity:322/948 - (33%)
Similarity:465/948 - (49%) Gaps:122/948 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 TTTPRSTTTTTTRRPTTTTPRCTTT--TSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTSTCSP 315
            |..|...|||||  |||.|...|.:  |....|||.|..:|.:..||.          |||:.:.
Zfish    27 TLAPSIVTTTTT--PTTVTTETTASNLTFVIPPTTATSETTPSNLTSE----------TTSSNAT 79

  Fly   316 TRTTPRSTTTTSTSRPTTTTPRCTTTPSTSRPTTTTPRSTTKTSTCAPTTTTPRPTTTPSTSRPT 380
            :.|||.:.|:.:|  |:..|...|.:.:||.   |||.:.|..:|.:..|:..:|:...|..:|:
Zfish    80 SETTPSNVTSETT--PSNVTSETTPSNATSE---TTPSNVTSETTPSNVTSEIKPSNVTSEIKPS 139

  Fly   381 TTTPRSTTTTSTSRPTTTTPRSTTTTTTRRPTT--TTPRSTT--TTSTSRPTTTTPRSTTTTTTS 441
            ..|..:|.:..||.   |||.:.|:.||....|  |||.:.|  ||.::..:.|||.:.|:.|| 
Zfish   140 NVTSETTPSNVTSE---TTPSNVTSETTPSNVTLETTPSNVTSETTPSNVASETTPSNVTSETT- 200

  Fly   442 RPTTTTPRSTTTTCTCSPTTTTPRSTTTTSTSRPTTTTPRSTTTTSTSGPTTTTPRSTTTTTTSG 506
             |:..|..:|.:..|   :.|||.:.|:.:|....|:....||.||.:.|||.|..:..||.|| 
Zfish   201 -PSNVTSETTPSNVT---SETTPSNMTSETTPSNVTSVNTPTTATSATIPTTATSATILTTATS- 260

  Fly   507 PTTTTPRSTTTTCTCSPTTTTPRSTTTPSTSRPTTTTPRSTTTTCTCSPTT-TTPRSTTTTSTSR 570
              .|||.:.|:..|.|..|    |.||||.....||....|:.|...:.|: |||.:.|:.:|  
Zfish   261 --ETTPSNATSETTPSKVT----SATTPSNMTLETTHLNVTSETINSNVTSETTPLNVTSVNT-- 317

  Fly   571 PTTTTPRSTTTTTTSR--PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTS 633
            |||.|..:..||.||.  ||..|.::|....|| .||....:..||.::|.:.|.|  ||.|||:
Zfish   318 PTTATLATIPTTATSATIPTIATSKTTPLNVTS-VTTAITVTLETTPSNGTSVTKP--TTATSTA 379

  Fly   634 GPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSG 698
            .||..|..:|.:|:||..|:||....|||:||..|:||..|.||     |:|.|..:|:||:.|.
Zfish   380 SPTAATLETTPSTATSATTSTTAILATTTATSATTSTTAISATT-----PSTATSATTSTTAISA 439

  Fly   699 PTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGP 763
            .|.:|..|.||::.:...||   .:|..|.:.|:|:|..:|:||:.|..|.:...|:||.||: .
Zfish   440 TTPSTVPSATTSAIAILATT---HSTEISATTPSTSTSATTSTTAISATTPSIDTSSTTPSTA-T 500

  Fly   764 TTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPT 828
            :.|||  :|.||.:.|:|.|..:|.:|:||..|.:|..|.||.||: .:.|||  :|.||.:.|.
Zfish   501 SATTP--STATSATTPSTATSATTPSTATSATTPSTATSATTPSTA-TSATTP--STATSATAPL 560

  Fly   829 TTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTT 893
            |.|..:|.:::||..|:||..|.||.|.. .:.|||  :|.||.:.|.|.|   :.||.:|..:.
Zfish   561 TVTSATTHSSATSATTSTTETSATTPSFE-TSATTP--STATSATAPLTVT---SATTHSSATSA 619

  Fly   894 TTPRSTTTTSTSGPTTTTPRSTTTTSTSCPTTTTPRS----TTTTCTSGPTTTTPRSTTTTCTSC 954
            |||...|:.:||  ||.|..:|.:.:||..|..|..|    :|.|..:.|:|.|..:|.:|.|..
Zfish   620 TTPSFVTSATTS--TTETSANTPSFATSVTTPLTESSAITHSTMTLATTPSTVTRATTPSTVTRT 682

  Fly   955 PTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPTTTTPRSTTK---TSTCAPTTTTPRSTTTTST 1016
            |   ||.:.||..|  |:|.|..:|.:|.|   |.|||.:.||   |||...|.|||.|||.:::
Zfish   683 P---TPSNATTVIT--PSTVTRATTPSTAT---TVTTPSTVTKATTTSTATTTVTTPSSTTRSNS 739

  Fly  1017 SRPTTTTPRSTTTTTTSRPTTTTPRSTTTP--------STSRPTTTTPRSTTTTSTSRPTTTTPR 1073
            :   :|...|.:::|..:.|..|.::||||        |.|...|.|.::..|...:..|.....
Zfish   740 A---STVTGSASSSTGGKSTAGTYQTTTTPPPANLGVISLSFKLTDTFQAVYTDLNNAVTKAYVE 801

  Fly  1074 ----------------------STTKTSTCAPTTTTPRSTTTTTTSRPTTTTPRSTTTTTTS--- 1113
                                  :.....:.|..:|....||::||  |..|..::|.....:   
Zfish   802 NIKSQFYPVYKKRYPNYFGMIINKLSAGSVAADSTLQFDTTSSTT--PNATDAKNTLIQAINSGG 864

  Fly  1114 -RPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTSRPTTT 1150
             ..|......|....:|..|:|...||..|.|:...||
Zfish   865 INLTIDNTSITAVQVSSNGTSTAASSTAITQTTTVATT 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sgs1NP_523475.3 None
LOC799643XP_017211382.2 COG3942 51..>344 CDD:332523 108/324 (33%)
DUF4573 90..>225 CDD:317546 46/147 (31%)
SEA 775..886 CDD:321958 19/112 (17%)
SEA 908..1003 CDD:307516
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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