DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgs1 and AT3G22142

DIOPT Version :9

Sequence 1:NP_523475.3 Gene:Sgs1 / 33701 FlyBaseID:FBgn0003372 Length:1286 Species:Drosophila melanogaster
Sequence 2:NP_001078199.1 Gene:AT3G22142 / 5008021 AraportID:AT3G22142 Length:1480 Species:Arabidopsis thaliana


Alignment Length:1416 Identity:372/1416 - (26%)
Similarity:476/1416 - (33%) Gaps:279/1416 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 YPDPVQPCDTDSNPTTTKPRQKTKRPKSTRRTTKRTKRPRRKTTKWTTKRATKRTTKRTTRRRPT 112
            :|.|..|         |||....|.|      ||....|:..|.|...|       ..:.:..|:
plant   130 HPHPKPP---------TKPHPHPKPP------TKHHPHPKPPTIKPPPK-------PPSVKPPPS 172

  Fly   113 TPKTPDTTDSPITTTGAECTCSDRTTASSTDSTTDRTTVTNTDWTTPLCTDTPPCTCSEESSTAI 177
            |||.|.|...|                |:....|.:         .|.||.|||          :
plant   173 TPKPPTTNPPP----------------STPQPPTHK---------PPPCTPTPP----------V 202

  Fly   178 PSSPCIDTSTVIP--TSPCTQETTTPTPTCSTQGTQTTPCTCAQTTTTPRST------------- 227
            .|.|.....|.:|  .:|...::...||..:|..|.|.|.|.....|.|.:|             
plant   203 ASPPMATPPTQMPPIATPPIAKSPVATPPIATPPTATPPITIPPVATPPITTPPIANPPIIMPPI 267

  Fly   228 ----------TTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTTTTRRPTTTTPRCTTTTSTCA 282
                      |....|:|..|||.:||......|..|.|.||....|  |...||..||......
plant   268 ATPPVAAPPITNPPISKPPVTTPPTTTPPIAKPPIATPPISTPPAAT--PPAATPPITTLPPAKP 330

  Fly   283 PTTTTPRSTTTTT------TSRPTTTTPRCTTTTSTCSPTRTTPRSTTTTSTSRPTTTTPRCTT- 340
            |...:|..|...|      .:.|.|.||...|......||..:|.||...|.| |..|.|..|: 
plant   331 PVAISPIVTPPVTPIAQPPVATPPTATPPVATPPIATPPTSKSPISTPPISES-PVATPPTATSP 394

  Fly   341 --TPSTSRPTTTTPRSTTKTSTCAPTTTTPRPTTTPSTSRPTTTTPRSTT----TTSTSRPTTTT 399
              ||..::|...|| ...|:....|.|.|| |..||...:|...||.:||    |...::|...|
plant   395 IKTPPPAKPPVATP-PIAKSPIATPPTATP-PVATPPIEKPPVATPPTTTPPTATPPVAKPPVET 457

  Fly   400 PRSTTTTTTRRPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTTCTCSPTTTTP 464
            |...|..|.:.|.:|.|.|....:|  |...||..||.|....|..|.|.:...  ...|...||
plant   458 PPIATPPTAKPPISTPPISKPPVAT--PPAATPPITTPTPVKPPVATPPLAIPP--VAKPPVVTP 518

  Fly   465 RSTTTTSTSRPTTTTPRSTTTTSTSGPTTTTPRSTTTTTTSGPTTTTPRSTTTTCTCSPTTTTPR 529
            .:.|....:.|...:|.:|..|:|  |...||........:.||||.|  |.|.....|...||.
plant   519 PTATPPIATPPIAKSPVATPPTAT--PPVATPPIAKPPVVTPPTTTPP--TATPPVAKPPVATPP 579

  Fly   530 STTTPSTSRPTTTTPRSTTTTCTCSPTTTTPRST---TTTSTSRPTTTTPRSTTTTTTSRPTTTT 591
            ..|.|:...|.:|.|.|.      ||..|.|.:|   ||...::|...||...|......|..|.
plant   580 IATPPTAKPPISTPPISK------SPVATPPAATPPITTPPPAKPPVATPPIATPPIAKPPVATP 638

  Fly   592 PRSTTTTSTS---GPTTTTPRSTTTTSTSGPTTTTPRSTTTTS----TSGPTTTTPRSTTTTSTS 649
            |.:|...:||   .|...||...|......|....|.:|...:    .:.||.|.|.:|...:|.
plant   639 PTATPPIATSPVAKPPVATPPIKTPPPAKPPVAIPPIATPPVAKPPVATPPTATPPIATPPIATP 703

  Fly   650 ---GPTTTTPRSTTTTSTSGPTTTTPRST--------TTTSTSGPTTTTPRSTTTTSTSGPTTTT 703
               .|.|.||...|......|||..|.:|        .|..|:.|...||..........|..|.
plant   704 PVVTPPTATPPVATPPIAKPPTTIPPTATPPVAMPPIATPPTAKPPIATPPIAIPPVAKPPVVTP 768

  Fly   704 PRSTTTTST----SGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTST---S 761
            |.:|...:|    ..|..|.|.:|...:|  |....|...|..:|:.||.|.|.:....:|   :
plant   769 PTATPPIATPPIAKSPVATPPTATPPVAT--PPIAKPPVATPPTTAPPTATPPVAKPPVATPPIA 831

  Fly   762 GPTTTTPRSTTTTSTSGPTTTTPRST---TTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTS 823
            .|.|..|...|...:..|..|.|.:|   ||...:.|...||...|......|..|.|.:|...:
plant   832 TPPTAKPPILTPPISKPPVATPPAATPPITTPPPAKPPVATPPIATPPIAKPPVATPPTATPPIA 896

  Fly   824 TS---GPTTTTPRSTTTTSTSGPTTTTPRSTTTTS---TSGPTTTTPRSTTTTSTSGPTTTTPRS 882
            ||   .|....|...|......|....|.:|...:   .:.|.|.||...|:...:.|..|.|.:
plant   897 TSPVAKPPVAIPPIKTPPPAKPPVAIPPIATPPVAKPPVATPPTATPPIATSPIATPPVVTPPTA 961

  Fly   883 TTTTST----SGPTTTTPRST--------TTTSTSGPTTTTPRSTTTTSTSCPTTTTPRSTTTT- 934
            |:..:|    ..||||.|.:|        .|..|:.|...||..........|..|.|.:...| 
plant   962 TSPVATPPIAKPPTTTPPTATPPVAMPPIATPPTAKPPVATPPIANPPVEKPPVATPPIAKPPTV 1026

  Fly   935 ---CTSGPTTTTPRSTTTTCT-------------SCPTTTTPRSTTTTCTSCPTTTTPRSTTTTC 983
               ....|..|:|.:|..|.|             :.|..|.|...|...|:.||...|..|....
plant  1027 LPPIAKPPVETSPTATPPTATPPVAIPPVVKPPVAIPPITKPPVATPPVTNPPTAMPPIVTPPPI 1091

  Fly   984 TSGPTTTTPRSTTKTST----CAPTTTTPRSTT--------TTSTSRPTTTTPRSTTTTTTSRPT 1036
            .:.|...:|.:|...||    ..|..|.|.:||        |..|:.|....|....:.....|.
plant  1092 VTPPIAKSPIATPPVSTPPIAKPPIATPPVATTPIAKPPIATPPTANPPVANPPIAKSPIAKPPI 1156

  Fly  1037 TTTPR---STTTPSTSRPTTTTPRSTTTTSTSRPTTTTPRSTTKTSTCAPTTTTPRSTTTTTTSR 1098
            .|.|.   |..||...:|...||........|.|..|.|  ..|.....|..|.|...|....:.
plant  1157 ATPPTAMPSIATPPIGKPPVATPPMAKPPVASPPIATPP--IIKPPVATPPITKPPVATPPVATP 1219

  Fly  1099 PTTTTPRSTT---TTTTSRPTTTTPRSTTTPCTSRPTTTTPRSTT-------------TTTTSRP 1147
            |....|.:|:   |...::|..|||...|.|....|..|.|.:|.             |...::|
plant  1220 PIAKPPVATSPIETPPVAKPPVTTPPVATPPIVKPPIVTPPIATPPIAKSPIAPPPIGTPPIAKP 1284

  Fly  1148 TTTTPRSTTTPCPTTTPSASPTRTTTTRRPCPCHP---QPPYQIPPWSWWYPNPTYPNPVWPWQP 1209
            ...|| .|.||...|:|.|.|...|    |.|..|   :||...|        ||...||     
plant  1285 PVATP-PTATPPVATSPIAKPPVAT----PPPATPPVAKPPVATP--------PTVTPPV----- 1331

  Fly  1210 NPVVPQWPQMPGY-------PNQWPQLPGYPQQLPPPLPSP--QWPWSWP--------KPPVVQP 1257
              ..|...:.||.       |...|.:...|...||....|  ..|.:.|        .||...|
plant  1332 --ATPPIAKPPGARPPVATPPVATPPIAKSPVATPPMTKPPVASSPIATPPIAKTPIATPPTTMP 1394

  Fly  1258 GDCE------NICENLLKGVKY--------------QEDLI----RRCLCT 1284
            ..|.      ..|.:||.|:.:              .|.|:    ..||||
plant  1395 KTCPIDTLKLGSCVDLLGGLVHIGIGKSAKEKCCPVVEGLVDLDAAVCLCT 1445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sgs1NP_523475.3 None
AT3G22142NP_001078199.1 Hydrophob_seed 1396..1479 CDD:291230 11/50 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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