DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hoe2 and Indy

DIOPT Version :9

Sequence 1:NP_608878.1 Gene:hoe2 / 33700 FlyBaseID:FBgn0031649 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster


Alignment Length:611 Identity:103/611 - (16%)
Similarity:218/611 - (35%) Gaps:169/611 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 KNSEFRLHIYSDVEVDLAIVLNYNPLIVNARTGSILAGVILLIFYALLVWELFERTFVAMICSIL 374
            |.|.|..:.:..:.|.|..:|....:::|       .|......|.|||..:|..| .|:...:.
  Fly    32 KCSNFFANHWKGLVVFLVPLLCLPVMLLN-------EGAEFRCMYLLLVMAIFWVT-EALPLYVT 88

  Fly   375 SVTTLACFNDRPNM-----DEIIQWMDMELLTLLFCMMLLILILTETGVFDYLAVFCFEISGGKI 434
            |:..:..|   |.|     |:..:....:.|.:....:::.|.:....:...||:...:|.|...
  Fly    89 SMIPIVAF---PIMGIMSSDQTCRLYFKDTLVMFMGGIMVALAVEYCNLHKRLALRVIQIVGCSP 150

  Fly   435 WPMIYSLCLVTCLVSSVLDNMTTVLLLTPVAIRLCEVMQLD------------------------ 475
            ..:.:.|.:||..:|..:.|.....::.|:...:.|.:|..                        
  Fly   151 RRLHFGLIMVTMFLSMWISNAACTAMMCPIIQAVLEELQAQGVCKINHEPQYQIVGGNKKNNEDE 215

  Fly   476 -PLPV------VMGIIVHANIGGALTPIGDPISI----IVSTNHFIVDNDVTFPTFVAHTFPGVI 529
             |.|.      .:||...:::||..|.||...::    |...........:.||||:.::.|.::
  Fly   216 PPYPTKITLCYYLGIAYASSLGGCGTIIGTATNLTFKGIYEARFKNSTEQMDFPTFMFYSVPSML 280

  Fly   530 LAVIQSCVYLRLFYHNIDALRLNEPKEMSELRREMKVWQRALNAVASCSKDAQLV-RGTLQAKIK 593
            :..:.:.|:|:..:                    |.:|:..       ||:||.| ||...|.: 
  Fly   281 VYTLLTFVFLQWHF--------------------MGLWRPK-------SKEAQEVQRGREGADV- 317

  Fly   594 QLKRTLRRLQKGVGSTEVYTNTLDELKQKYPIKNKTLLLQSAGALLFVIVCFFIQSVPHWRTLP- 657
             .|:.:.:..|.:|...::.                  :|.....:|::|.:|.:.       | 
  Fly   318 -AKKVIDQRYKDLGPMSIHE------------------IQVMILFIFMVVMYFTRK-------PG 356

  Fly   658 --LGWVALLG------------VILLLIILNRD-----------------------DMEHLMHRI 685
              |||..||.            |:::..:|..:                       ..:.:..::
  Fly   357 IFLGWADLLNSKDIRNSMPTIFVVVMCFMLPANYAFLRYCTRRGGPVPTGPTPSLITWKFIQTKV 421

  Fly   686 EWTTLLFFAAMFVMMECVERLGIFACISELTEHVILS---VGKSHRLAMAIFMILWMSALASSIL 747
            .|..:......|.:.|..::.|    :::|..:.::.   :..|..|.:.|.:.::::|.:|:: 
  Fly   422 PWGLVFLLGGGFALAEGSKQSG----MAKLIGNALIGLKVLPNSVLLLVVILVAVFLTAFSSNV- 481

  Fly   748 DSIPVAAIMVKLVTSLVAKPSLGLPLQPLVWALTLG--ASMGGNGTLYGASANVIAAGIAEQHGY 810
                   .:..::..::|:.||.:.:.||...|..|  .||..:..: ....|.:.||.|.....
  Fly   482 -------AIANIIIPVLAEMSLAIEIHPLYLILPAGLACSMAFHLPV-STPPNALVAGYANIRTK 538

  Fly   811 KLSFTRYLRTVFPMMLGQITLMTVYL 836
            .::......|:       ||::|:::
  Fly   539 DMAIAGIGPTI-------ITIITLFV 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hoe2NP_608878.1 ArsB 343..837 CDD:223983 96/578 (17%)
P_permease 350..837 CDD:238536 95/571 (17%)
IndyNP_730363.2 SLC13_permease 68..545 CDD:238535 91/547 (17%)
dass 70..545 CDD:273267 90/545 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448710
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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