DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3036 and garP

DIOPT Version :10

Sequence 1:NP_608873.1 Gene:CG3036 / 33695 FlyBaseID:FBgn0031645 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_417596.1 Gene:garP / 947642 ECOCYCID:EG12760 Length:444 Species:Escherichia coli


Alignment Length:475 Identity:121/475 - (25%)
Similarity:203/475 - (42%) Gaps:94/475 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RQVLNLLTMLGFMLNYALRVNLTIAIVDMVRPNVTSAVNATLVGNSTAANSTASPDGVDVYEERF 83
            |.::.|:..:...:|||.|..|:||..::.:....|||:                          
E. coli    16 RYLILLIIFIVTAVNYADRATLSIAGTEVAKELQLSAVS-------------------------- 54

  Fly    84 PWDSYQTNFVLGCFFWGYILTELPGGRLAELIGGRRVFGHSMLWASLLTLIT------PLA-AHI 141
                  ..::...|.|.|:|.::|||.|.:..|.::|:.:|:.:.||.|.:.      ||| |.|
E. coli    55 ------MGYIFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGI 113

  Fly   142 NYVVLIVVRVVLGFMLGASWPAIHPVAAVWIPPMER---SKFMSNMMASSLGAAITMPICGYLIS 203
            :   :..:|.:|||....|:||...:.|.|.|..||   |...::....||  |:..|:.|:|..
E. coli   114 S---MFFMRFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSL--ALFSPLLGWLTF 173

  Fly   204 VAGWASVFYLTGAVGLLWSLAWFTFVYETPATHPRISAEERREIEE--AIGTTTSKKRPSHVPWG 266
            ..||..||.:.|.:|.:.:..|...:: .|..|||:||||.:.|.|  |:.....||..|....|
E. coli   174 AWGWEHVFTVMGVIGFVLTALWIKLIH-NPTDHPRMSAEELKFISENGAVVDMDHKKPGSAAASG 237

  Fly   267 -------QLLCSPAVWAIIICHGLAVFGFFTV-------VNQLPTFMSKILHFDIKQNGLFSSLP 317
                   |||.:..:..:.       ||.:.:       :...|.::.:.....|.:.||.:|:|
E. coli   238 PKLHYIKQLLSNRMMLGVF-------FGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIP 295

  Fly   318 YLGKYVMAVASSYLADYLRKKGTLSTTATRKLFTTFALVIPGLLMIVQVFL-GY--DATWSVTIF 379
            .|..:...|.....:|||.|:| ||.|..|||     .::.|:|:...:.| .|  :.|..|.:.
E. coli   296 ALCGFAGGVLGGVFSDYLIKRG-LSLTLARKL-----PIVLGMLLASTIILCNYTNNTTLVVMLM 354

  Fly   380 SLALFAHGAVTAGYLGNGL--DIAP-NFGGTIFGLANTLSSFGGFLSTSMVGALTYKDQSFHSWQ 441
            :||.|..|   .|.||..:  |.|| ...|...|:.|...:....::..::|.|..:..||::  
E. coli   355 ALAFFGKG---FGALGWPVISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNA-- 414

  Fly   442 IVFWILAATYISAAVVFAIL 461
                  |..::..:.:.|::
E. coli   415 ------ALVFVGCSALMAMV 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3036NP_608873.1 MFS_SLC17 24..462 CDD:340876 120/470 (26%)
garPNP_417596.1 2A0114 25..434 CDD:273326 119/466 (26%)

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