DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3036 and liz1

DIOPT Version :9

Sequence 1:NP_001260058.1 Gene:CG3036 / 33695 FlyBaseID:FBgn0031645 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001342731.1 Gene:liz1 / 2540342 PomBaseID:SPBC2G2.01c Length:514 Species:Schizosaccharomyces pombe


Alignment Length:422 Identity:90/422 - (21%)
Similarity:148/422 - (35%) Gaps:105/422 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GLQRVRNFLSCRQVLNLLTMLGFMLNYALRVNLTIAIVDMVRPNVTSAVNATLVGNSTAANSTAS 72
            ||.:|...|       |:.:..|:|:|.. |:..|..:|.     :|..||.|.|    ......
pombe    16 GLNKVEQKL-------LIKIDWFILSYCC-VSYFINYLDR-----SSINNAYLSG----MQEDLK 63

  Fly    73 PDGVDVYEERFPWDSYQTNFVLGCFFWGYILTELPGGRLAELIGGRRVFGHSMLWASLLTLITPL 137
            ..|.::.:         .|.|..|   |||:.:|||....:.:..|       ||.|::.::..|
pombe    64 MHGNELQD---------INVVFTC---GYIIGQLPGSYALQRVPAR-------LWFSVMNILWGL 109

  Fly   138 AAHINYVV-----LIVVRVVLGFMLGASWPAIHPVAAVWIPPMERSKFMSNMMASSLGAAITMPI 197
            ....::.|     |:::|..:.....:::...|.:...|....|..|......||.|   :....
pombe   110 MTIFSFAVHSVRALMILRFFMAVAEASTFAGTHYILGAWYKESELCKRAGIFSASGL---VGTMF 171

  Fly   198 CGYLIS-----------VAGWASVFYLTGAVGL---LWSLAWFTFVYETPATHPRISAEERREIE 248
            .|||.:           ::||..:|.:.|.:.:   |:.|..|..|.||  |......|:.:|:.
pombe   172 AGYLQTAVHSSLNGKGGLSGWRWLFIIDGILTIPLSLYGLFLFPDVPET--TKAPYFTEQEKELS 234

  Fly   249 EAIGTTTSKKRPSHVPWGQLLCSPAV------WAIIICHGLAVFGFFTVVNQLPTFMSKILHFDI 307
            ........||:|        |...|:      |.|   :||.:...|:...|.           |
pombe   235 FKRLPARPKKKP--------LTLKAIKDIVRSWRI---YGLCILWIFSGETQA-----------I 277

  Fly   308 KQNGLFSS-LPYLGKYVMAVASSYLADYLRKKGTLSTTAT-----------RKLFTTFALVIPGL 360
            ..|.|... :.:..|:.:|..::| ...:...|.:||...           |..|..|..||  .
pombe   278 AVNVLMGQWMKWSNKFSVAQINNY-PTVITAVGVVSTLGASVISDKLAGNPRWPFGLFLCVI--T 339

  Fly   361 LMIVQVFLGYDATWSVTIFSLALFAHGAVTAG 392
            .:...:.|.::.......|  |.||.|...||
pombe   340 TVSATILLAWNVPDGAKFF--AYFASGCTYAG 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3036NP_001260058.1 2A0114euk 19..477 CDD:129972 86/411 (21%)
MFS 83..461 CDD:119392 73/347 (21%)
liz1NP_001342731.1 MFS_1 37..401 CDD:311564 82/394 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

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