DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3036 and slc-17.1

DIOPT Version :10

Sequence 1:NP_608873.1 Gene:CG3036 / 33695 FlyBaseID:FBgn0031645 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001041300.1 Gene:slc-17.1 / 181777 WormBaseID:WBGene00022647 Length:479 Species:Caenorhabditis elegans


Alignment Length:455 Identity:136/455 - (29%)
Similarity:228/455 - (50%) Gaps:29/455 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RQVLNLLTMLGFMLNYALRVNLTIAIVDMVRPNVTSAVNATLVGNSTAANSTASPDGVDVYEERF 83
            |.|:.:|.:|||...||:|.||:||||:|     ||       |.....|.|.    :.|..:..
 Worm    38 RHVVAILALLGFANIYAMRANLSIAIVEM-----TS-------GTERKVNGTT----LHVLGDFE 86

  Fly    84 PWDSYQTNFVLGCFFWGYILTELPGGRLAELIGGRRVFGHSMLWASLLTLITPLAAHINYVVLIV 148
            .|.......||..||:|||:::||||.||...|.:.:|.......::.||:||..|.:.|.:|:.
 Worm    87 NWTPMTQGVVLSSFFYGYIVSQLPGGYLAYTHGAKTIFFAGTFGTAVFTLLTPPFARMGYGMLVF 151

  Fly   149 VRVVLGFMLGASWPAIHPVAAVWIPPMERSKFMSNMMASS-LGAAITMPICGYLISVAGWASVFY 212
            .|.:.|.:.|.::||:|.:.:.|.||||::|..:...:.| .|..:.||:..||....||..:|:
 Worm   152 ARFMEGLLEGVTYPAMHVIWSRWAPPMEQTKLATFAFSGSYFGTVVAMPLSAYLGEHFGWPMIFW 216

  Fly   213 LTGAVGLLWSLAWFTFVYETPATHPRISAEERREIE-EAIGTTTSKKRPSH--VPWGQLLCSPAV 274
            ..||:|::|.:.|:..|::.|...|:||..|...:: :|:.       .:|  |||.|:|.|..|
 Worm   217 FFGALGVIWCMVWYKTVHDRPEDDPKISTSELALLQRDAVS-------QNHYIVPWAQILRSKPV 274

  Fly   275 WAIIICHGLAVFGFFTVVNQLPTFMSKILHFDIKQNGLFSSLPYLGKYVMAVASSYLADYLRKKG 339
            ||:|:.|.....||:.::..||..:..|..:::::.|:.|||||.......:....|.||||:..
 Worm   275 WAVIVAHSAQNLGFYIMLTNLPKMLKDIAGYNVEKAGIASSLPYFLMGFQIITGGQLCDYLRRDK 339

  Fly   340 TLSTTATRKLFTTFALVIPGLLMIVQVFLGYDATWSVTIFSLALFAHGAVTAGYLGNGLDIAPNF 404
            ...|...||:......:...:.:.: |....::...|..||:::...|....|:..|.||:||.:
 Worm   340 HYDTLFVRKMACALGFIGQSVFLFL-VMTTSNSLLLVLFFSISIGLGGICWCGFSVNHLDLAPQY 403

  Fly   405 GGTIFGLANTLSSFGGFLSTSMVGALTYKDQSFHSWQIVFWILAATYISAAVVFAILGSGELQPW 469
            .|.:...:||.::..|.....:|||:. ::.:...|.::.:|:.:.|:..|.:|.......||||
 Worm   404 AGHLMATSNTFATIPGIFGPLLVGAIV-QNGTIGEWNVIMYIIISAYLLGAAIFWKFADATLQPW 467

  Fly   470  469
             Worm   468  467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3036NP_608873.1 MFS_SLC17 24..462 CDD:340876 130/441 (29%)
slc-17.1NP_001041300.1 MFS_SLC17 42..460 CDD:340876 130/442 (29%)

Return to query results.
Submit another query.