DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3036 and slc-17.9

DIOPT Version :9

Sequence 1:NP_001260058.1 Gene:CG3036 / 33695 FlyBaseID:FBgn0031645 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001379067.1 Gene:slc-17.9 / 181189 WormBaseID:WBGene00011643 Length:516 Species:Caenorhabditis elegans


Alignment Length:497 Identity:131/497 - (26%)
Similarity:218/497 - (43%) Gaps:44/497 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QRVRNFLSCRQVLNLLTMLGFMLNYALRV---NLTIAIVDMVRPNVTSAVNATLVGNSTAANSTA 71
            ::.:.|.|.|...:.|..|.|:   ||.:   |::.::|.||:...|         |.|...:..
 Worm    12 EKSKIFPSTRLFFSFLLCLCFV---ALAIGTSNISQSMVCMVKKPDT---------NYTCPLAEP 64

  Fly    72 SPDGVDV-YEERFPWDSYQTNFVLGCFFWGYILTELPGGRLAELIGGRRVFGHSMLWASLLTLIT 135
            ..:.:.. :.::|.|.|.|...:.....:|.:...:.|.: |:.:.|:.....:|.:..:...:.
 Worm    65 EVEAIPCNHPKQFAWSSIQQGLIYSGQNFGSLFMVITGWQ-ADRLNGKWTIVAAMAFIIVSNAVL 128

  Fly   136 PLAAHINYVVLIVVRVVLGFMLGASWPAIHPVAAVWIPPMERSKFMSNMMAS-SLGAAITMPICG 199
            |::|..::.::..:||:.||......||...:...|.||.||...:..:.:. .:|..|.:||.|
 Worm   129 PISAGASFALVFFLRVLTGFGDALLSPASSSLITRWFPPKERPSALGIVTSGRQIGTLIILPIGG 193

  Fly   200 YLIS------VAGWASVFYLTGAVGLLWSLAWFTFVYETPATHPRISAEE----RREIEEA-IGT 253
            :|..      :.||.::|||:..|.....:.|..|..:.|:.|..||..|    .|:|||. ||.
 Worm   194 WLCGSDGSKFLGGWPAIFYLSSVVAAAVLVIWVVFSADKPSKHLCISHNEEAYINRKIEEENIGK 258

  Fly   254 TTSKKRPSHVPWGQLLCSPAVW---AIIICHGLAVFGFFTVVNQLPTFMSKILHFDIKQNGLFSS 315
            ..::|   :.||..:..|..||   |.::||   .|....::..||.|.|.:|......|||.|:
 Worm   259 RNNRK---NTPWKAIFTSKQVWVAVAALVCH---EFPLVIMLQFLPKFFSDVLGLSNTVNGLVSA 317

  Fly   316 LPYLGKYVMAVASSYLADYLRKKGTLSTTATRKLFTTFALVIPGLLMIVQVFLG--YDATWSVTI 378
            ||....::....|:.||.||...|.|..|.:.|:|...|.:..|:.:.....:.  ..|.|::.|
 Worm   318 LPMAILFLSKCLSASLASYLTANGYLRKTQSCKIFNFIASLGLGICIAATPLMSNLQHAIWAIII 382

  Fly   379 FSLALFAHGAVTAGYLGNGLDIAPNFGGTIFGLANTLSSFGGFLSTSMVGALTYKDQSFHSWQIV 443
            ..||....|..|.|.|...:.:||.|.|.|.|||..::|.....:..::..: .:..|.|.|.||
 Worm   383 LCLANAFAGLHTPGVLTAIVQLAPAFSGIITGLAFAVASCFSIFNKLLISQI-LRTGSKHEWTIV 446

  Fly   444 FWILAATYISAAVVFAILGSGELQPWNNPPERVRI-SDVTQE 484
            |.|.|...|...:.|.:.||.|...|.:  .||.: .|..|:
 Worm   447 FEISAFVAILPTIFFTLWGSAERTEWAS--NRVSVPKDADQK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3036NP_001260058.1 2A0114euk 19..477 CDD:129972 126/478 (26%)
MFS 83..461 CDD:119392 108/394 (27%)
slc-17.9NP_001379067.1 2A0114euk 5..474 CDD:129972 127/481 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28615
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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