DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3036 and slc-17.6

DIOPT Version :9

Sequence 1:NP_001260058.1 Gene:CG3036 / 33695 FlyBaseID:FBgn0031645 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_490947.2 Gene:slc-17.6 / 171781 WormBaseID:WBGene00017398 Length:546 Species:Caenorhabditis elegans


Alignment Length:508 Identity:116/508 - (22%)
Similarity:213/508 - (41%) Gaps:75/508 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LQRVRNFLSCRQVLNLLTMLGFMLNYALRVNLTIAIVDMVRPNVTSAVNATLVGNSTAANSTASP 73
            ||.:| |.:...:.....:.|.|     |....:|:||:||                :.|.|..|
 Worm    22 LQSIR-FQTALLISAACVVFGLM-----RTCFGMAMVDIVR----------------SGNGTFHP 64

  Fly    74 DGVDVYEERFPWD-----SYQTNFVLGCFFWGYILTELPGGRLAELIGGRRVFGHSMLWASLLTL 133
               |::.|   |.     :..|:|.:|.|     :...|...||:.:|.:.:...::|.....:|
 Worm    65 ---DLHME---WSGDEQANIHTSFYIGAF-----IAVFPSEFLAKKLGPKNLLSFALLLNIFGSL 118

  Fly   134 ITPLAAHI--NYVVLIVVRVVLGFMLGASWPAIHPVAAVWIPPMERSKFMS-----NMMASSLGA 191
            :||.:|..  :|..:..:|:::||..|...||...:.:.|.|..|:|..|:     |.:..::..
 Worm   119 LTPFSAIYLRSYFPVAAIRLIMGFGYGFVIPAGSVLISSWFPLSEKSTAMAIFTTGNQIGIAVSM 183

  Fly   192 AITMPICGYLISVAGWASVFYLTGAVGLLWSLAWFTFVYETPATHPRISAEE---------RREI 247
            .:|..:| .|....||..||.:.|.:|.::.:.|...:.:.|.....|:|.|         ||..
 Worm   184 FLTAKLC-QLHFFEGWPLVFIVYGLIGAVFLVIWHVRLADKPRESKYITATELTYIKGGKQRRNR 247

  Fly   248 EEAIGTTTSKKRPSHVPWGQLLCSPAVWAIIICHGLAVFGFFTVVNQLPTFMSKILHFDIKQNGL 312
            .|.|...|        |:.:::.:..|.||..|.....|....:|..||.:.......::..||:
 Worm   248 AETIVRAT--------PYMKIILNGCVCAICACSFAQSFVLVALVTYLPKYNQIAFKMNLTHNGI 304

  Fly   313 FSSLPYLGKYVMAVASSYLADYLRKKGTLSTTATRKLFTTFALVIPGLLMIVQVFLGYDATWSV- 376
            :||||:..:.:..:..:.:||.:::: .::.||..|:....|.....:.:::..:..:|:...| 
 Worm   305 WSSLPFFIQMITKLLFAIIADKVKQR-KVNATAVTKVSNAIASFASAIFIVIAAYGPFDSAELVQ 368

  Fly   377 --TIFSLALFAHGAVTAGYLGNGLDIAPNFGGTIFGLANTLSSFGGFLSTSMVGALTYKDQSFHS 439
              .|.|:|.|:  |...||..:.:.:||.|...|...|...:.....|:..::|.:| ...:.:.
 Worm   369 LSIIVSMAAFS--AYVPGYNTSIVTVAPQFTAFISSYAQLYAQIASTLAPIVIGRIT-SHGTIYE 430

  Fly   440 WQIVFWILAATYISAAVVFAILGSGELQPWNNPPE-----RVRISDVTQEEGV 487
            |:..|:.||.......::|.|.|.|..:||...|.     |:..|....|:|:
 Worm   431 WKCAFYSLAGVLAVTGLIFQIFGHGRTEPWGETPSNATSARLSTSVTMCEDGM 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3036NP_001260058.1 2A0114euk 19..477 CDD:129972 109/486 (22%)
MFS 83..461 CDD:119392 89/401 (22%)
slc-17.6NP_490947.2 MFS 30..453 CDD:391944 103/467 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28615
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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