DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3008 and RIOK1

DIOPT Version :9

Sequence 1:NP_608871.1 Gene:CG3008 / 33693 FlyBaseID:FBgn0031643 Length:603 Species:Drosophila melanogaster
Sequence 2:XP_011513235.2 Gene:RIOK1 / 83732 HGNCID:18656 Length:580 Species:Homo sapiens


Alignment Length:581 Identity:160/581 - (27%)
Similarity:264/581 - (45%) Gaps:158/581 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 NEELRRIERQ-----QNKQSKVTVTLNKFLRDGDAEFLHDTAEDDYEEDELEQQKHDWDRFED-- 171
            |.:|:.::.:     ::.|..|.       .:|:.| :.|..|:.|::|:     .|||..|.  
Human    38 NRDLKTVKEKDDILFEDLQDNVN-------ENGEGE-IEDEEEEGYDDDD-----DDWDWDEGVG 89

  Fly   172 ----------------NERQLDSIPRCGFKVNKEGEMITKHDPQLCAVRNAQRVMSFPPEFPTGD 220
                            |.:..||         ...:|.|..|..|....|...:..         
Human    90 KLAKGYVWNGGSNPQANRQTSDS---------SSAKMSTPADKVLRKFENKINLDK--------- 136

  Fly   221 AAGFDMKLSNKVFNQLRAHSRRGRSDKH---EKV--ATAEMGLDAGTRLLLYKLINNQILEQING 280
                 :.:::.|.|::...||:..:|.:   :|.  ||.|..||..||::|:|::...|:.:|||
Human   137 -----LNVTDSVINKVTEKSRQKEADMYRIKDKADRATVEQVLDPRTRMILFKMLTRGIITEING 196

  Fly   281 IISTGKEAVILHANSDANYTGSNEHGHQSGVLVPPQLLPRECAIKIFKTTLNEFKQRDRYIKDDY 345
            .|||||||.:.|| |.||  |.:.                  ||||:||::..||.||:|:..::
Human   197 CISTGKEANVYHA-STAN--GESR------------------AIKIYKTSILVFKDRDKYVSGEF 240

  Fly   346 RFKDRFSKQNHRVIINMWAEKEMHNLMRMQAIGLNVPDVVVLKKHVLVMRFIGDNHNAAPKLKDA 410
            ||:..:.|.|.|.::..||||||.||:|:....:..|:.::|:.|||||.|||.:...||.||:.
Human   241 RFRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAEIPCPEPIMLRSHVLVMSFIGKDDMPAPLLKNV 305

  Fly   411 RLSDAELSCAYEEIVAAMHKLYNEAKLVHADMSEYNILWFEGKCWFIDVAQSVEPKHPSALEFLM 475
            :||:::....|.:::..|.::|.:|:|||||:||:|:|:..|..:.|||:||||..||.|||||.
Human   306 QLSESKARELYLQVIQYMRRMYQDARLVHADLSEFNMLYHGGGVYIIDVSQSVEHDHPHALEFLR 370

  Fly   476 RDCGNIVNFFERRGLPNIYTKEQLFEFITG-----------LNSEVHTAAQ------LEQIHTRG 523
            :||.|:.:||.|..:. :.|..:||||:|.           |:..:..|:|      ..|.|...
Human   371 KDCANVNDFFMRHSVA-VMTVRELFEFVTDPSITHENMDAYLSKAMEIASQRTKEERSSQDHVDE 434

  Fly   524 ASISQATAPNQEECPDELKPLEYPFELAWEKSQQDRAAQKALQQAQDN----------------- 571
            ....:|..|   ...:|:|..|...::..:..::|    .|:...|||                 
Human   435 EVFKRAYIP---RTLNEVKNYERDMDIIMKLKEED----MAMNAQQDNILYQTVTGLKKDLSGVQ 492

  Fly   572 ---------------NDNK-------TDTDKDQE---------TDDNENDSDDKEKINKTA 601
                           :|::       :|||.:::         |.|.:.|..:::|:.|.|
Human   493 KVPALLENQVEERTCSDSEDIGSSECSDTDSEEQGDHARPKKHTTDPDIDKKERKKMVKEA 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3008NP_608871.1 RIO1 242..505 CDD:224632 108/267 (40%)
RIO3_euk 278..488 CDD:270697 90/209 (43%)
RIOK1XP_011513235.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1718
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1238900at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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