DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3008 and AT5G37350

DIOPT Version :9

Sequence 1:NP_608871.1 Gene:CG3008 / 33693 FlyBaseID:FBgn0031643 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_851100.1 Gene:AT5G37350 / 833709 AraportID:AT5G37350 Length:531 Species:Arabidopsis thaliana


Alignment Length:494 Identity:160/494 - (32%)
Similarity:240/494 - (48%) Gaps:79/494 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 DYEEDELEQQKHDWDRFEDNE----------RQLDSIPRCGFKVNKE------GEMITKHDPQLC 201
            :||| |||....|.....|::          :..|.:...||.::..      |.....:...|.
plant    19 EYEE-ELEDDDDDLSLSSDSDIAEALDWLDGKDDDELIGGGFSLHARRPNAHGGHGSRPNSSALQ 82

  Fly   202 AVRN-AQRVMSFPPEFP-TGDAAGFDMKLSNKVFNQLRAHSRR---GRSDKHEKV--ATAEMGLD 259
            .:.| ||::.|.....| .|......:.:||.|...:|...|.   |||...:|.  ||.|..||
plant    83 PISNKAQKLTSHVRASPLEGWEGRVKVGMSNSVTTAIRGSLRDTEIGRSRNTDKADRATVEQALD 147

  Fly   260 AGTRLLLYKLINNQILEQINGIISTGKEAVILHA-NSDANYTGSNEHGHQSGVLVPPQLLPRECA 323
            ..||::|::::|..:...:||.|||||||.:.|| .||.:                      |.|
plant   148 PRTRMVLFRMLNRGVFNDVNGCISTGKEANVYHATKSDGS----------------------ELA 190

  Fly   324 IKIFKTTLNEFKQRDRYIKDDYRFKDRFSKQNHRVIINMWAEKEMHNLMRMQAIGLNVPDVVVLK 388
            ||::||::..||.||||::.||||:..:.:.|.|.::..|||||..||.|:.|.|:..|.|::|:
plant   191 IKVYKTSVLVFKDRDRYVQGDYRFRYGYCRHNPRKMVKTWAEKEQRNLKRLHAAGIRCPAVILLR 255

  Fly   389 KHVLVMRFIGDNHNAAPKLKDARLSDAELSCAYEEIVAAMHKLYNEAKLVHADMSEYNILWFEGK 453
            .|||||.|||.:..|||:||||.||..:|...|.|::..|..||.:.||||.|:||||||:|||.
plant   256 LHVLVMEFIGRDGWAAPRLKDAALSLDKLRECYLELIIQMRVLYQKCKLVHGDLSEYNILYFEGH 320

  Fly   454 CWFIDVAQSVEPKHPSALEFLMRDCGNIVNFFERRGLPNIYTKEQLFEFITGLN-SEVHTAAQLE 517
            .:.|||:|||:..||.||.||..||.::.:||::.|:. :.|..:||:||.... |:.:..:.||
plant   321 LYIIDVSQSVDLDHPLALNFLREDCDHVSDFFKKHGVA-VMTIRELFDFIVDPTISDENVDSYLE 384

  Fly   518 QIHTRGASISQATAPNQEECPDELKPLEY-PFEL-AWEKSQQDRAAQKALQQAQDNND------- 573
            ::..:  .|.:.....::|..|.:....| |..| |....:.|.|   .:...||..|       
plant   385 EVQRK--VIERGEISVEDEIADSVFMKSYIPKSLDAVNNPEADVA---KITSGQDTGDMLYQTIT 444

  Fly   574 ----------------NKTDTDKDQETDDNENDSDDKEK 596
                            |..:.::::|....|...::.||
plant   445 GLKDALPKVDEQQIEVNAEEEEEEEEEGSGEESEEESEK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3008NP_608871.1 RIO1 242..505 CDD:224632 116/268 (43%)
RIO3_euk 278..488 CDD:270697 97/210 (46%)
AT5G37350NP_851100.1 RIO1 124..395 CDD:224632 121/295 (41%)
RIO1_euk 166..355 CDD:270698 97/210 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1718
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1238900at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45723
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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