DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3008 and AT2G24990

DIOPT Version :9

Sequence 1:NP_608871.1 Gene:CG3008 / 33693 FlyBaseID:FBgn0031643 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_180071.1 Gene:AT2G24990 / 817038 AraportID:AT2G24990 Length:537 Species:Arabidopsis thaliana


Alignment Length:501 Identity:160/501 - (31%)
Similarity:248/501 - (49%) Gaps:71/501 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 HDTAEDDYEEDELE-------QQKHDWDRFEDNERQLDSIPRCGFKVNKE------GEMITKHDP 198
            ::...||.::|:|.       .:..||...:|::..:..    ||.::..      |.....:..
plant    20 YEEEHDDDDDDDLSLSSDSDIAEALDWLDGKDDDELIGG----GFSLHARRPNAHGGHGSRPNSS 80

  Fly   199 QLCAVRN-AQRVMSFPPEFP-TGDAAGFDMKLSNKVFNQLRAHSRR---GRSDKHEKV--ATAEM 256
            .|..:.| ||::.|.....| .|......:.:||.|...:|...|.   |||...:|.  ||.|.
plant    81 SLQPISNKAQKLTSHVRASPLEGWEGRVKVGMSNSVTTAIRGSLRDTEIGRSRNTDKADRATVEQ 145

  Fly   257 GLDAGTRLLLYKLINNQILEQINGIISTGKEAVILHA-NSDANYTGSNEHGHQSGVLVPPQLLPR 320
            .||..||::|::::|..:...:||.|||||||.:.|| .||.:                      
plant   146 ALDPRTRMVLFRMLNRGVFNDVNGCISTGKEANVYHATKSDGS---------------------- 188

  Fly   321 ECAIKIFKTTLNEFKQRDRYIKDDYRFKDRFSKQNHRVIINMWAEKEMHNLMRMQAIGLNVPDVV 385
            |.|||::||::..||.||||::.||||:..:.:.|.|.::..|||||..||.|:.|.|:..|.|:
plant   189 ELAIKVYKTSVLVFKDRDRYVQGDYRFRYGYCRHNPRKMVKTWAEKEQRNLKRLHAAGIRCPAVI 253

  Fly   386 VLKKHVLVMRFIGDNHNAAPKLKDARLSDAELSCAYEEIVAAMHKLYNEAKLVHADMSEYNILWF 450
            :|:.|||||.|||.:..|||:||||.||..:|...|.|::..|..||.:.||||.|:||||||:|
plant   254 LLRLHVLVMEFIGRDGWAAPRLKDAALSLDKLRECYLELIIQMRVLYQKCKLVHGDLSEYNILYF 318

  Fly   451 EGKCWFIDVAQSVEPKHPSALEFLMRDCGNIVNFFERRGLPNIYTKEQLFEF-----ITGLNSEV 510
            ||..:.|||:|||:..||.||.||..||.::.:||::.|:. :.|..:||:|     ||..|.:.
plant   319 EGHLYIIDVSQSVDLDHPLALNFLREDCDHVSDFFKKHGVA-VMTIRELFDFIVDPAITDENVDS 382

  Fly   511 HTAAQLEQIHTRG-ASISQATAPN---QEECPDELKPLEYP-FELAWEKSQQDR----------- 559
            :......::..|| .|:....|.:   :...|..|..:..| .::|...|.||.           
plant   383 YLEEVQRKVIERGEISVEDEIADSVFMKSYIPKSLDAVNNPEADVAKITSGQDTGDMLYQTITGL 447

  Fly   560 --AAQKALQQAQDNNDNKTDTDKDQETDDNENDSDDKEKINKTANH 603
              |..|..:|..:.||.:.:.:.::|.|....:..::|:..:...|
plant   448 KDALPKIEEQKIEVNDEEKEEEGEEEEDGESEEGSEEEESEEELGH 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3008NP_608871.1 RIO1 242..505 CDD:224632 116/273 (42%)
RIO3_euk 278..488 CDD:270697 97/210 (46%)
AT2G24990NP_180071.1 RIO1 125..396 CDD:224632 120/293 (41%)
RIO1_euk 167..356 CDD:270698 97/210 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1718
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1238900at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45723
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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