DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3008 and Riok1

DIOPT Version :10

Sequence 1:NP_608871.1 Gene:CG3008 / 33693 FlyBaseID:FBgn0031643 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_077204.2 Gene:Riok1 / 71340 MGIID:1918590 Length:567 Species:Mus musculus


Alignment Length:517 Identity:160/517 - (30%)
Similarity:250/517 - (48%) Gaps:108/517 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 IAQLLQSQFD-----HEYNEELRRIERQ---------QNKQSKVTVTLNKFLRDGDAEFLHDTAE 151
            :|.::..|||     ...|:||:.|..:         ||..::|         .||||   ...|
Mouse     8 MASVVPGQFDDADSSDSENKELQPIHAEDGGVLLKSLQNAAAEV---------KGDAE---TDEE 60

  Fly   152 DDYEEDELEQQKHDWDRFEDNERQLDSIPRC------GFKVNKE------GEMITKHDPQLCAVR 204
            |||::|:      || ..:|...:|..  .|      .::.|::      .:|.|..|..|....
Mouse    61 DDYDDDD------DW-YLDDATGKLTK--GCTWNGGSNYQANRQTSNYNSAKMSTPIDKSLRKFE 116

  Fly   205 NAQRVMSFPPEFPTGDAAGFDMKLSNKVFNQLR---AHSRRGRSDKHEKVATAEMGLDAGTRLLL 266
            |...:          :.......::|||..:||   |.|.|.: ||.:: ||.|..||..||::|
Mouse   117 NKINL----------NKLNVTDSVTNKVTVKLRQKEAESYRIK-DKADR-ATVEQVLDPRTRMIL 169

  Fly   267 YKLINNQILEQINGIISTGKEAVILHANSDANYTGSNEHGHQSGVLVPPQLLPRECAIKIFKTTL 331
            :||::...:.:|:|.|||||||.:.:|:     |.|.|                ..||||:||::
Mouse   170 FKLLHKDHISEIHGCISTGKEANVYYAS-----TPSGE----------------SRAIKIYKTSI 213

  Fly   332 NEFKQRDRYIKDDYRFKDRFSKQNHRVIINMWAEKEMHNLMRMQAIGLNVPDVVVLKKHVLVMRF 396
            ..||.||:|:..::||:..:.|.|.|.::..||||||.||.|::...:..|:.:.|:.|||:|.|
Mouse   214 LMFKDRDKYVTGEFRFRRGYCKGNPRKMVRTWAEKEMRNLCRLKTANIPCPEPIRLRSHVLLMGF 278

  Fly   397 IGDNHNAAPKLKDARLSDAELSCAYEEIVAAMHKLYNEAKLVHADMSEYNILWFEGKCWFIDVAQ 461
            ||.:...||.||:.:||:::....|.:::..|.|:|.:|:|||||:||:|:|:..|..:.|||:|
Mouse   279 IGKDDMPAPLLKNVQLSESKARELYLQVIQYMRKMYQDARLVHADLSEFNMLYHGGDVYIIDVSQ 343

  Fly   462 SVEPKHPSALEFLMRDCGNIVNFFERRGLPNIYTKEQLFEFITG-----------LNSEVHTAAQ 515
            |||..||.|||||.:||.|:.:||.:..:. :.|..:||:|:|.           |...:..|:|
Mouse   344 SVEHDHPHALEFLRKDCTNVNDFFSKHAVA-VMTVRELFDFVTDPSITADNMDAYLEKAMEIASQ 407

  Fly   516 ------LEQIHTRGASISQATAPNQEECPDELKPLEYPFELAWEKSQQDRAAQKALQQAQDN 571
                  ..|.|.......||..|   ...:|:|..|...::.....::|    .||...|||
Mouse   408 RTKEEKTSQDHVDEEVFKQAYIP---RTLNEVKNYERDVDIMMRLKEED----MALNTQQDN 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3008NP_608871.1 RIO3_euk 278..488 CDD:270697 87/209 (42%)
Riok1NP_077204.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 8/29 (28%)
RIO1_euk 181..370 CDD:270698 87/209 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 495..567
Blue background indicates that the domain is not in the aligned region.

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