DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3008 and SPAC10F6.10

DIOPT Version :9

Sequence 1:NP_608871.1 Gene:CG3008 / 33693 FlyBaseID:FBgn0031643 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_593261.2 Gene:SPAC10F6.10 / 2542923 PomBaseID:SPAC10F6.10 Length:497 Species:Schizosaccharomyces pombe


Alignment Length:515 Identity:160/515 - (31%)
Similarity:253/515 - (49%) Gaps:110/515 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 EELRRIERQQNKQSKVTVTLNKFLRDGDAEF--LHDTAEDDY-EEDELEQQKHDWDRFEDN--ER 174
            |||:. :.|.|::              ::|:  ..|.:::|| .||::     ||::...|  .|
pombe     3 EELKN-DAQTNEE--------------ESEYSDFSDGSDNDYFREDDI-----DWNQASSNYSAR 47

  Fly   175 QLDSIPRCGFKVNKEGEMITKHDPQLCAVRNAQRVMSFPPEFPTGDAAGFDMKLSNKVFNQLRAH 239
            | ::......|:|.    :..|...|....|                   ::||:::    ..|.
pombe    48 Q-ENFGNNSSKINS----VNDHVSTLSRYVN-------------------NIKLNDR----FEAE 84

  Fly   240 SRRGRSDKHEKVATAEMGLDAGTRLLLYKLINNQILEQINGIISTGKEAVILHANSDANYTGSNE 304
            .:....||.:: ||:|..||..||::|.|||||..:.:|||.|||||||.:.||        :||
pombe    85 DKSSIKDKSDR-ATSEQVLDPRTRMILLKLINNGTISEINGCISTGKEANVYHA--------TNE 140

  Fly   305 HGHQSGVLVPPQLLPRECAIKIFKTTLNEFKQRDRYIKDDYRFKDRFSKQNHRVIINMWAEKEMH 369
            .|             :..||||:||::..||.||||:..::||:..::|:|.|.::.:|||||:.
pombe   141 DG-------------KHFAIKIYKTSILVFKDRDRYVSGEFRFRHGYNKRNPRKMVRLWAEKEIR 192

  Fly   370 NLMRMQAIGLNVPDVVVLKKHVLVMRFIGDNHN-AAPKLKDARLSDAELSCAYEEIVAAMHKLYN 433
            ||.|:.|.|:..|:.::||:|||:|.|:||... |.|||||..::..|.:..|:.:...|..|::
pombe   193 NLKRVAAAGIPCPEPILLKQHVLLMSFLGDKKGWAYPKLKDIDMTPGEATKLYQLVARNMRILFH 257

  Fly   434 EAKLVHADMSEYNILWFEGKCWFIDVAQSVEPKHPSALEFLMRDCGNIVNFFER-----RGLPNI 493
            ...|||||:||||:|:.:||.:||||:||||..||.:::||..|..||..||.|     ..||  
pombe   258 VCHLVHADLSEYNLLYHKGKVYFIDVSQSVEHDHPQSIDFLRMDILNISTFFRRLNAGCLSLP-- 320

  Fly   494 YTKEQLFEFITGLNSEVHTAAQLEQIHTRGASISQATAPNQEECPDEL------KPLEYPFELAW 552
                |||:|||...|     .:.|.:.||..:|.: ..|..||..:|.      :.|:..:::..
pombe   321 ----QLFKFITEEGS-----CEKEAMKTRLNAIYE-EEPTTEEYEEEFLKTYVPRTLDEVYDIDR 375

  Fly   553 EKSQQDRAAQKAL----------QQAQDNNDNKTDTDKDQETDDNENDSDDKEKINKTAN 602
            :....:.....:|          |:...|:..|...|:....:.:|:| ||...|:...|
pombe   376 DTEIVNAGGVNSLVYKHLLNTDFQKLDLNDTTKNQNDQILPNETSESD-DDANSISSMEN 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3008NP_608871.1 RIO1 242..505 CDD:224632 114/268 (43%)
RIO3_euk 278..488 CDD:270697 92/215 (43%)
SPAC10F6.10NP_593261.2 RIO1 74..335 CDD:224632 119/297 (40%)
RIO1_euk 122..311 CDD:270698 91/209 (44%)
RNA_polI_A34 <417..488 CDD:285426 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1718
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45723
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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