DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and WIP5

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_175533.1 Gene:WIP5 / 841545 AraportID:AT1G51220 Length:337 Species:Arabidopsis thaliana


Alignment Length:414 Identity:83/414 - (20%)
Similarity:120/414 - (28%) Gaps:170/414 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LSHPCFNCDEKFGNAVDLDEHHRLAHQTPAFLSRCLMCSIYGIH-----SATQQPNEYKCTQCGS 182
            :|:|.  |...|.|..|   |:...:.|.       :..||..|     |.|..||....|.   
plant     1 MSNPA--CSNLFNNGCD---HNSFNYSTS-------LSYIYNSHGSYYYSNTTNPNYINHTH--- 50

  Fly   183 ICTTAMLAAGQQGFMEQQEAAVTPD-----DQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQ 242
              ||                :.:|:     :.||.::...:|       ||:| |.:|:....||
plant    51 --TT----------------STSPNSPPLREALPLLSLSPIR-------HQEQ-QDQHYFMDTHQ 89

  Fly   243 QQQQQ---------------------QQQQQELLEQQQREMQEQAQQQQVH-----HHQQDQDLA 281
            .....                     :..:..:......:.|:|...:.|.     |...|.|..
plant    90 ISSSNFLDDPLVTVDLHLGLPNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHH 154

  Fly   282 GDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANPGVPAPAS 346
            ||            |::..:                               |.|        |..
plant   155 GD------------LHRGHH-------------------------------YWI--------PTP 168

  Fly   347 SGVLVG-TQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPYT-------- 402
            |.:|:| ||           ..||.|.|||.....:.||...|..:....|:....|        
plant   169 SQILIGPTQ-----------FTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRL 222

  Fly   403 -CSYC------------GKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVK-DYLTKHIRTHTG 453
             |..|            .|......||:.|.:...|.|||.|..|.|:|:|| |:     |||..
plant   223 PCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDW-----RTHEK 282

  Fly   454 E--KPYTCPYCDKRFTQRSALTVH 475
            .  |.:.|. |...|..:.:|..|
plant   283 NCGKLWYCS-CGSDFKHKRSLKDH 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 35/130 (27%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
C2H2 Zn finger 403..423 CDD:275368 6/31 (19%)
C2H2 Zn finger 431..451 CDD:275368 8/20 (40%)
zf-H2C2_2 443..468 CDD:316026 7/26 (27%)
C2H2 Zn finger 459..480 CDD:275368 5/17 (29%)
WIP5NP_175533.1 SFP1 <71..234 CDD:227516 38/232 (16%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
C2H2 Zn finger 264..280 CDD:275368 8/20 (40%)
C2H2 Zn finger 290..307 CDD:275368 5/17 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 51 1.000 Inparanoid score I2624
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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