DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and SCRT1

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_112599.2 Gene:SCRT1 / 83482 HGNCID:15950 Length:348 Species:Homo sapiens


Alignment Length:196 Identity:56/196 - (28%)
Similarity:81/196 - (41%) Gaps:31/196 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 AIQANPGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADATPKE 398
            ::.:.||......:|.....:..|.......||.|.:|.||:.|...|:.|::.|........:.
Human   159 SLGSGPGGRGGTRAGAGTEARAGPGAAGAGGRHACGECGKTYATSSNLSRHKQTHRSLDSQLARR 223

  Fly   399 RP----------------------YTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVK 441
            .|                      :.|..|||:|::...|:.|.|.|||||||.|.:|.|:|:.:
Human   224 CPTCGKVYVSMPAMAMHLLTHDLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADR 288

  Fly   442 DYLTKHIRTHTGEKPYTCPYCDKRFTQRSALTVHTTKLHPLXGRPGGGRQLPVPAPAAPPPPTHP 506
            ..|..|::||:..|.:.|..|.|.|..:|.|..|.... .. |..||        ||||.||...
Human   289 SNLRAHMQTHSAFKHFQCKRCKKSFALKSYLNKHYESA-CFKGGAGG--------PAAPAPPQLS 344

  Fly   507 P 507
            |
Human   345 P 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 39/128 (30%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
C2H2 Zn finger 403..423 CDD:275368 8/19 (42%)
C2H2 Zn finger 431..451 CDD:275368 6/19 (32%)
zf-H2C2_2 443..468 CDD:316026 9/24 (38%)
C2H2 Zn finger 459..480 CDD:275368 7/20 (35%)
SCRT1NP_112599.2 SNAG domain. /evidence=ECO:0000250 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 129..189 4/29 (14%)
C2H2 Zn finger 224..244 CDD:275368 1/19 (5%)
COG5048 <245..>313 CDD:227381 27/67 (40%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..322 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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