DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cf2 and NTT

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_191326.1 Gene:NTT / 824936 AraportID:AT3G57670 Length:383 Species:Arabidopsis thaliana


Alignment Length:511 Identity:95/511 - (18%)
Similarity:138/511 - (27%) Gaps:229/511 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 STTNPQEQRLPR----------PEDQSPAPPPPPPSSATTSTAAPATPTHQVATVIANMDTLKTA 58
            |:|||....||.          |:......|||||      |..|:.|..:.             
plant    24 SSTNPSPHPLPPVTPPSSFFFFPQSGDLRRPPPPP------TPPPSPPLREA------------- 69

  Fly    59 FLPNLSMDPNVHVSPHYCPMCHQQFERPQHVADHMQLCHGITLNAQGAIATLDGGHPQAQQHPKL 123
             ||.||:.|......|:            |..||:                       .|:.|..
plant    70 -LPLLSLSPANKQQDHH------------HNHDHL-----------------------IQEPPST 98

  Fly   124 SHPCFNCDEKFGNAVDLDEHHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSICTTAM 188
            |..           ||.|.||:..|                 |:.....::          .|..
plant    99 SMD-----------VDYDHHHQDDH-----------------HNLDDDDHD----------VTVA 125

  Fly   189 LAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQQQE 253
            |..|                 ||:.:.::|.............:..|||:..:.::....:....
plant   126 LHIG-----------------LPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHG 173

  Fly   254 LLEQQQREMQEQAQQQQVHHHQQDQDLAGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEPL 318
            .:...:               ..|:|..|                 .:||..:|           
plant   174 AVGGGE---------------DDDEDSVG-----------------GDGGCRIS----------- 195

  Fly   319 SLSDSGDVVNSVPVYAIQANPG---VPAPASSGVLVG-TQTVPADLAHKIRHKCPDCPKTFKTPG 379
                             :.|.|   :|.|  |.:|:| ||           ..||.|.|||....
plant   196 -----------------RLNKGQYWIPTP--SQILIGPTQ-----------FSCPVCFKTFNRYN 230

  Fly   380 TLAMHRKIHTGEADATPKERPYT---------CSYC-------------GKSFTQSNTLKQHTRI 422
            .:.||...|..:....|:....|         | ||             .|......||:.|.:.
plant   231 NMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC-YCCAPGCRNNIDHPRAKPLKDFRTLQTHYKR 294

  Fly   423 HTGEKPFHCGYCEKSFSVK-DYLTKHIRTHTGE--KPYTCPYCDKRFTQRSALTVH 475
            ..|.|||.|..|.|:|:|: |:     |||...  |.:.| .|...|..:.:|..|
plant   295 KHGIKPFMCRKCGKAFAVRGDW-----RTHEKNCGKLWYC-ICGSDFKHKRSLKDH 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 35/131 (27%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
C2H2 Zn finger 403..423 CDD:275368 7/32 (22%)
C2H2 Zn finger 431..451 CDD:275368 7/20 (35%)
zf-H2C2_2 443..468 CDD:316026 7/26 (27%)
C2H2 Zn finger 459..480 CDD:275368 5/17 (29%)
NTTNP_191326.1 C2H2 Zn finger 323..346 CDD:275368 6/23 (26%)
C2H2 Zn finger 303..319 CDD:275368 7/20 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 51 1.000 Inparanoid score I2624
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.