DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cf2 and zbtb4

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_001339146.2 Gene:zbtb4 / 798710 ZFINID:ZDB-GENE-100318-5 Length:1570 Species:Danio rerio


Alignment Length:482 Identity:91/482 - (18%)
Similarity:141/482 - (29%) Gaps:219/482 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EQRLP----RPEDQSPAPPPPPPSSATTSTAAPATPTHQVATVIANMDTLKTAFLPNLSMDPNVH 70
            |..||    .|...|..|||..|||.:. |::|.  ||..|:.   .|:.:....|.|       
Zfish   193 ELSLPLPSINPHSSSSTPPPHSPSSVSL-TSSPL--THPTASF---HDSFRAVPKPEL------- 244

  Fly    71 VSPHYCPMCHQQFERPQHVADHMQLCHGITLNAQGAIATLDGGHPQAQQHPKLSHPCFNCDEKFG 135
                .|.:||:.|.....:..||:|..|      |.:.:                 |.:|.:.| 
Zfish   245 ----LCGVCHRLFSTASSLTVHMRLHRG------GRVLS-----------------CRHCGKAF- 281

  Fly   136 NAVDLDEHHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQGFMEQQ 200
                                         ||:...|.:|..|               :||     
Zfish   282 -----------------------------IHNKRLQSHEATC---------------RQG----- 297

  Fly   201 EAAVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQQQELLEQQQREMQEQ 265
                     |||..     :.|:|                            |.||  :.|::.:
Zfish   298 ---------LPAFP-----VPPKE----------------------------EPLE--EGEVEGE 318

  Fly   266 AQQQQVHHHQQDQDLAGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEPLSLSDSGDVVNSV 330
            ...:.....|..|:....|.|.||..||.:            |.:.:...:  :|.|....|..|
Zfish   319 RTDEAAEPEQLGQETRPGQPAKKVRDLTAR------------HAEALTCGD--TLGDDDHFVKVV 369

  Fly   331 PVYAIQANPGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADAT 395
            ..:.|                                                            
Zfish   370 DGHII------------------------------------------------------------ 374

  Fly   396 PKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCP 460
                 |.||.|.:|:...::||:|:.:|:..:.:.|.:|:|.|::.:|.|||...||||:.|.|.
Zfish   375 -----YFCSVCERSYMTLSSLKRHSNVHSWRRKYPCHFCDKVFALAEYRTKHEVWHTGERRYQCI 434

  Fly   461 YCDKRFTQRSALTVHTTKLHPLXGRPG 487
            :|.:.|.....|..|....|.:  .||
Zfish   435 FCWEAFPTYYNLKTHQKAFHGI--NPG 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 25/106 (24%)
C2H2 Zn finger 368..388 CDD:275368 0/19 (0%)
C2H2 Zn finger 403..423 CDD:275368 7/19 (37%)
C2H2 Zn finger 431..451 CDD:275368 8/19 (42%)
zf-H2C2_2 443..468 CDD:316026 12/24 (50%)
C2H2 Zn finger 459..480 CDD:275368 5/20 (25%)
zbtb4XP_001339146.2 C2H2 Zn finger 246..266 CDD:275368 6/19 (32%)
C2H2 Zn finger 274..290 CDD:275368 6/45 (13%)
C2H2 Zn finger 377..397 CDD:275368 7/19 (37%)
C2H2 Zn finger 405..425 CDD:275368 8/19 (42%)
C2H2 Zn finger 433..451 CDD:275368 5/17 (29%)
PTZ00121 <630..946 CDD:173412
C2H2 Zn finger 955..975 CDD:275368
C2H2 Zn finger 981..1002 CDD:275368
C2H2 Zn finger 1056..1076 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.