DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and ZNF3

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001305065.1 Gene:ZNF3 / 7551 HGNCID:13089 Length:453 Species:Homo sapiens


Alignment Length:307 Identity:86/307 - (28%)
Similarity:143/307 - (46%) Gaps:56/307 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 RLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQQQE----------LLEQQQREMQE-----QAQQ 268
            ||.|.::...:.:..|::.......::.:.:..||          ||.:.|:::.:     :|.:
Human    74 RLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYE 138

  Fly   269 QQVHHHQQDQDLAGDQVALKVP---PLTV------------KLNKNAN----GGAIVSHPQVIIK 314
            ::|...:...:..|:::..|:|   .:||            |.|...|    ...::||.::.:.
Human   139 REVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVG 203

  Fly   315 EEP-------LSLSDSGDVVNSVPVYA----IQANPGVPAPASSGVLVGTQTVPADLAHKIRHKC 368
            :.|       .|.:.:.|::....::.    .:.|....|.:.|..|:..|.:...   :..::|
Human   204 DRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTG---EKPYEC 265

  Fly   369 PDCPKTFKTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGY 433
            .||.|||.....|.:||:||||       |:||.|:.|||:|:.|:||..|.||||||||:.|..
Human   266 SDCGKTFSCSSALILHRRIHTG-------EKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNE 323

  Fly   434 CEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSALTVHTTKLH 480
            |.|:||....|..|.|.|||||||.|..|.|.|:|.|.|..| .::|
Human   324 CGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQH-QRIH 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 54/106 (51%)
C2H2 Zn finger 368..388 CDD:275368 9/19 (47%)
C2H2 Zn finger 403..423 CDD:275368 10/19 (53%)
C2H2 Zn finger 431..451 CDD:275368 8/19 (42%)
zf-H2C2_2 443..468 CDD:463886 14/24 (58%)
C2H2 Zn finger 459..480 CDD:275368 8/20 (40%)
ZNF3NP_001305065.1 KRAB 57..98 CDD:460171 4/23 (17%)
COG5048 <182..360 CDD:227381 65/187 (35%)
C2H2 Zn finger 185..201 CDD:275368 3/15 (20%)
C2H2 Zn finger 209..229 CDD:275368 2/19 (11%)
C2H2 Zn finger 237..257 CDD:275368 5/19 (26%)
C2H2 Zn finger 265..285 CDD:275368 9/19 (47%)
C2H2 Zn finger 293..313 CDD:275368 10/19 (53%)
C2H2 Zn finger 321..341 CDD:275368 8/19 (42%)
C2H2 Zn finger 349..369 CDD:275368 8/20 (40%)
zf-H2C2_2 361..386 CDD:463886 3/10 (30%)
C2H2 Zn finger 377..397 CDD:275368
zf-H2C2_2 390..414 CDD:463886
C2H2 Zn finger 405..425 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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