DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and Zbtb42

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001119774.1 Gene:Zbtb42 / 691556 RGDID:1582758 Length:420 Species:Rattus norvegicus


Alignment Length:296 Identity:82/296 - (27%)
Similarity:126/296 - (42%) Gaps:51/296 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 LPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQQQELLEQQQREMQEQAQQQQVHHH 274
            ||:..|...:.||:.:.....::|.|...:......|..::....|:   ..::...:.:|.|  
  Rat   142 LPSWPPAFCQATPKAKPPSLGVKAVHPLPKFGPPSWQVSEESSGALD---LSLKPGPRPEQAH-- 201

  Fly   275 QQDQDLAGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANP 339
                           ||.   |.:.:...:|....|.::|.|..|.|:..   :|.|..|.::.|
  Rat   202 ---------------PPC---LLQTSQCSSIQQGAQPLVKAEQDSFSEQD---SSSPQSADRSPP 245

  Fly   340 GVPAPASSGVLV----------GTQ--------TVPADLAHKIRHK--CPDCPKTFKTPGTLAMH 384
            .|.|.|:.|:.|          |:|        .|.::.....||.  ||.|.|.|.:...|..|
  Rat   246 PVCASAARGLAVNLEPLHIQGTGSQQLGLHAEPVVDSEDLGPGRHLCICPLCCKLFPSTHALQPH 310

  Fly   385 RKIHTGEADA-----TPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYL 444
            ...|..|.|:     :|:....||..|.|:|:.:.|||:|.|.|:||||:.|..|.|||.....|
  Rat   311 LSAHFRERDSVRTRLSPEGAVPTCPLCSKTFSCTYTLKRHERTHSGEKPYTCVQCGKSFQYSHNL 375

  Fly   445 TKHIRTHTGEKPYTCPYCDKRFTQRSALTVHTTKLH 480
            ::|...||.|||:.|.:|::||||...|..|..|.|
  Rat   376 SRHAVVHTREKPHACRWCERRFTQSGDLYRHVRKFH 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 45/113 (40%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
C2H2 Zn finger 403..423 CDD:275368 9/19 (47%)
C2H2 Zn finger 431..451 CDD:275368 7/19 (37%)
zf-H2C2_2 443..468 CDD:463886 11/24 (46%)
C2H2 Zn finger 459..480 CDD:275368 9/20 (45%)
Zbtb42NP_001119774.1 BTB_POZ_ZBTB42 1..129 CDD:349737
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..204 5/49 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 216..248 9/34 (26%)
C2H2 Zn finger 294..314 CDD:275368 7/19 (37%)
COG5048 334..>388 CDD:227381 25/53 (47%)
C2H2 Zn finger 334..354 CDD:275368 9/19 (47%)
zf-H2C2_2 347..369 CDD:463886 12/21 (57%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
C2H2 Zn finger 390..408 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.

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