DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and Zfp110

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001347505.1 Gene:Zfp110 / 65020 MGIID:1890378 Length:832 Species:Mus musculus


Alignment Length:109 Identity:52/109 - (47%)
Similarity:71/109 - (65%) Gaps:7/109 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   367 KCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHC 431
            :|.:|.|.|:.....::|:|||||       ||||.|..|||:|.||::|.||.|||:||:||.|
Mouse   689 RCSECGKLFRNARYFSVHKKIHTG-------ERPYMCMACGKAFVQSSSLTQHLRIHSGERPFEC 746

  Fly   432 GYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSALTVH 475
            ..|.::|:.:..:::|:|||||.|||.|..|.|.|.|.|.||.|
Mouse   747 SECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRH 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 49/105 (47%)
C2H2 Zn finger 368..388 CDD:275368 6/19 (32%)
C2H2 Zn finger 403..423 CDD:275368 11/19 (58%)
C2H2 Zn finger 431..451 CDD:275368 5/19 (26%)
zf-H2C2_2 443..468 CDD:316026 13/24 (54%)
C2H2 Zn finger 459..480 CDD:275368 9/17 (53%)
Zfp110NP_001347505.1 KRAB 18..77 CDD:214630
SCAN 159..246 CDD:307924
KRAB 283..324 CDD:307490
C2H2 Zn finger 663..682 CDD:275370
C2H2 Zn finger 690..710 CDD:275368 6/19 (32%)
zf-H2C2_2 702..727 CDD:316026 15/31 (48%)
C2H2 Zn finger 718..738 CDD:275368 11/19 (58%)
zf-H2C2_2 730..754 CDD:316026 12/23 (52%)
C2H2 Zn finger 746..766 CDD:275368 5/19 (26%)
zf-C2H2 772..794 CDD:306579 10/19 (53%)
C2H2 Zn finger 774..794 CDD:275368 9/17 (53%)
zf-H2C2_2 786..811 CDD:316026 3/5 (60%)
C2H2 Zn finger 802..822 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4508
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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