DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and LOC563292

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_021332054.1 Gene:LOC563292 / 563292 -ID:- Length:749 Species:Danio rerio


Alignment Length:376 Identity:89/376 - (23%)
Similarity:132/376 - (35%) Gaps:132/376 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 PQAQQHPKLSHPCFNCDEKFGNAVDLDEHHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQ 179
            |..|  |...:||..|.:||.:...|..|.|..||.  .|:|                .:|:||.
Zfish   320 PYGQ--PLTVYPCMLCGKKFKSRGFLKRHTRNHHQD--VLTR----------------KKYQCTD 364

  Fly   180 CGSICTTAMLAAGQQGFMEQQEAAVTPDDQLPAM---APRDMRLTPEEQHHQQQLQAEHHHQQQH 241
            |              .|...::|::....::.|:   ||.:.....:|.|.|..|   ..|:.||
Zfish   365 C--------------DFTTNKKASLHNHMEVHALSNKAPFECETCGKEFHQQAAL---FSHRLQH 412

  Fly   242 QQQQQQQQQQQELLEQQQREMQEQAQQQQVHHHQQDQDLAGDQVALKVPPLTVKLNKNANGGAIV 306
                                          ||.:|....|   :|..:||.|.  ||        
Zfish   413 ------------------------------HHREQKTPTA---IASPLPPATA--NK-------- 434

  Fly   307 SHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANPGVPAPASSGVL------VGTQTVPADLAHKIR 365
            :|.......|                           .|..|:|      |.:::.|        
Zfish   435 THKCKFCDYE---------------------------TAEQGLLNRHLLAVHSKSFP-------- 464

  Fly   366 HKCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRI-HTGEKPF 429
            |.|.:|.|.|:.|..|..|.:.|||       |:||:|.||......|:.||.|.:. |:.|.||
Zfish   465 HICVECGKGFRHPSELKKHMRTHTG-------EKPYSCMYCDYKSADSSNLKTHVKTKHSRELPF 522

  Fly   430 HCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSALTVHTTKLH 480
            .|..|.::|:.::.||:|..||...:.:.|.:||.|.:..|.|..|...:|
Zfish   523 RCERCGQTFAEEEELTQHATTHDDARGHQCSHCDHRSSNSSDLKRHIISVH 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 38/107 (36%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
C2H2 Zn finger 403..423 CDD:275368 7/20 (35%)
C2H2 Zn finger 431..451 CDD:275368 6/19 (32%)
zf-H2C2_2 443..468 CDD:316026 9/24 (38%)
C2H2 Zn finger 459..480 CDD:275368 7/20 (35%)
LOC563292XP_021332054.1 Zfx_Zfy_act 43..313 CDD:309717
ROS_MUCR <330..360 CDD:327679 11/47 (23%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 362..382 CDD:275368 5/33 (15%)
C2H2 Zn finger 392..412 CDD:275368 5/22 (23%)
C2H2 Zn finger 438..459 CDD:275368 4/47 (9%)
COG5048 463..>518 CDD:227381 23/69 (33%)
C2H2 Zn finger 467..487 CDD:275368 7/19 (37%)
C2H2 Zn finger 495..516 CDD:275368 7/20 (35%)
C2H2 Zn finger 524..544 CDD:275368 6/19 (32%)
C2H2 Zn finger 552..573 CDD:275368 7/20 (35%)
C2H2 Zn finger 581..601 CDD:275368
C2H2 Zn finger 609..626 CDD:275368
C2H2 Zn finger 692..713 CDD:275370
C2H2 Zn finger 721..741 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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