DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and LOC549508

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_031759247.1 Gene:LOC549508 / 549508 XenbaseID:XB-GENE-29098987 Length:1464 Species:Xenopus tropicalis


Alignment Length:467 Identity:110/467 - (23%)
Similarity:172/467 - (36%) Gaps:132/467 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 NVHVSPH------YCPMCHQQFERPQHVADHMQLCHGITLNAQGAIATLDGGHPQAQQHPKLSHP 126
            :.|:..|      .||.|.:.::..:::.||:.:                        |...::|
 Frog   424 DAHIQTHTRASLFVCPECGRSYKDKRNLNDHLNV------------------------HTGKTYP 464

  Fly   127 CFNCDEKFGNAVDLDEHHRLAHQTPAFLSRCLMCS-----------IYGIHSATQQPNEYKCTQC 180
            |..|.:.|.....|..|..:......|  .|:.|.           .|.||:..:   .:.|::|
 Frog   465 CTECGKSFPLKRSLQRHLMIHTGEKPF--ECMECGKSFRYKSKLDIHYRIHTGVE---PFVCSEC 524

  Fly   181 GS-ICTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQQQ 244
            |. .....:|...|.|...::....|.       ..:..|:       |:||..   |.|.|..:
 Frog   525 GKRFRLKHLLEYHQMGHTGEKPFVCTE-------CGKSFRV-------QRQLTL---HLQTHTGE 572

  Fly   245 Q--------QQQQQQQELLEQQQREMQEQAQQ-----------QQVHHHQQDQDLAGDQVALKVP 290
            :        :..:.|.||....|....|:..:           :|:..|.|..  .|::     |
 Frog   573 KPFVCTECGKSFRVQGELTVHLQTHTGEKPFECSECGKSFRFKRQLTLHLQTH--TGEK-----P 630

  Fly   291 PLTVKLNKNAN-GGAIVSHPQVIIKEEPLSLSDSGD---VVNSVPVYAIQANPG-VPAPASSGVL 350
            .:..:..|:.. ...:..|.|....|:|...|:.|.   |...:.:: .|.:.| .|...|    
 Frog   631 FVCTECGKSFRVQSELTVHLQTHTGEKPFDCSECGKSFRVKRQLTLH-FQTHTGEKPFDCS---- 690

  Fly   351 VGTQTVPADLAHKIRHK-----------------CPDCPKTFKTPGTLAMHRKIHTGEADATPKE 398
                    :...:.|.|                 |.:|.|:|:..|.|.:|.:.|||       |
 Frog   691 --------ECGKRFRVKRQLTLHLQIHTGEKPFVCTECGKSFRVQGKLTVHLQTHTG-------E 740

  Fly   399 RPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCD 463
            :|:.||.|||||...:.|..|.:.|||||||.|..|.|||.||..||.|::|||||||:.|..|.
 Frog   741 KPFDCSECGKSFRVKSQLNLHLQTHTGEKPFDCSECGKSFRVKHQLTLHLQTHTGEKPFDCSECG 805

  Fly   464 KRFTQRSALTVH 475
            |.|..:..||:|
 Frog   806 KSFRVKHQLTLH 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 50/123 (41%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
C2H2 Zn finger 403..423 CDD:275368 9/19 (47%)
C2H2 Zn finger 431..451 CDD:275368 10/19 (53%)
zf-H2C2_2 443..468 CDD:463886 14/24 (58%)
C2H2 Zn finger 459..480 CDD:275368 7/17 (41%)
LOC549508XP_031759247.1 C2H2 Zn finger 183..203 CDD:275368
C2H2 Zn finger 210..230 CDD:275368
C2H2 Zn finger 238..258 CDD:275368
C2H2 Zn finger 298..318 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
C2H2 Zn finger 354..374 CDD:275368
C2H2 Zn finger 382..402 CDD:275368
C2H2 Zn finger 410..430 CDD:275368 1/5 (20%)
COG5048 <429..614 CDD:227381 38/230 (17%)
C2H2 Zn finger 438..458 CDD:275368 5/43 (12%)
C2H2 Zn finger 465..485 CDD:275368 5/19 (26%)
C2H2 Zn finger 493..513 CDD:275368 3/19 (16%)
C2H2 Zn finger 521..541 CDD:275368 5/19 (26%)
COG5048 545..949 CDD:227381 84/317 (26%)
C2H2 Zn finger 549..569 CDD:275368 7/36 (19%)
C2H2 Zn finger 577..597 CDD:275368 4/19 (21%)
C2H2 Zn finger 605..625 CDD:275368 3/19 (16%)
C2H2 Zn finger 633..653 CDD:275368 3/19 (16%)
C2H2 Zn finger 661..681 CDD:275368 4/20 (20%)
C2H2 Zn finger 689..709 CDD:275368 3/31 (10%)
C2H2 Zn finger 717..737 CDD:275368 7/19 (37%)
C2H2 Zn finger 745..765 CDD:275368 9/19 (47%)
C2H2 Zn finger 773..793 CDD:275368 10/19 (53%)
C2H2 Zn finger 801..821 CDD:275368 7/17 (41%)
C2H2 Zn finger 829..849 CDD:275368
C2H2 Zn finger 857..877 CDD:275368
C2H2 Zn finger 885..905 CDD:275368
C2H2 Zn finger 913..933 CDD:275368
C2H2 Zn finger 941..961 CDD:275368
COG5048 965..1346 CDD:227381
C2H2 Zn finger 969..989 CDD:275368
C2H2 Zn finger 997..1017 CDD:275368
C2H2 Zn finger 1025..1045 CDD:275368
C2H2 Zn finger 1083..1103 CDD:275368
C2H2 Zn finger 1111..1131 CDD:275368
C2H2 Zn finger 1139..1159 CDD:275368
C2H2 Zn finger 1167..1187 CDD:275368
C2H2 Zn finger 1195..1215 CDD:275368
C2H2 Zn finger 1223..1243 CDD:275368
C2H2 Zn finger 1251..1271 CDD:275368
C2H2 Zn finger 1279..1299 CDD:275368
C2H2 Zn finger 1307..1327 CDD:275368
C2H2 Zn finger 1335..1355 CDD:275368
C2H2 Zn finger 1363..1383 CDD:275368
zf-H2C2_2 1375..1399 CDD:463886
C2H2 Zn finger 1391..1411 CDD:275368
zf-H2C2_2 1403..1427 CDD:463886
C2H2 Zn finger 1419..1439 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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