DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and CG1792

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster


Alignment Length:359 Identity:81/359 - (22%)
Similarity:137/359 - (38%) Gaps:88/359 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 PNEYKCTQCG--SICTT-AMLAAGQQGFMEQQEAAVT-------PDDQLPAM--APRDMRLTPEE 224
            ||. .|..||  ..|:| :.|.......|..|...:|       |.::||..  :|.::.|....
  Fly     2 PNR-NCRTCGLFIFCSTPSNLFEEPNSVMLHQIEVLTGLFLLGGPGNELPPFICSPCELDLQTAI 65

  Fly   225 QHHQQQLQAEHHHQQ---------------------QHQQQQQQQQ-----QQQELLEQQQR--E 261
            ...::.::.:...|:                     |:.::..:.:     .::.|||:.:.  |
  Fly    66 AFRERVIRTQKTLQESPNLGNAELIESFAVGVEKEIQYAEEVTEIEVIDLLPEEHLLEETEEPYE 130

  Fly   262 MQEQAQQQQVHHHQQDQDLAGDQVALKVPP---LTVKLNKNANG-----GAIVSHPQVIIKEEPL 318
            :.||.:|.||....|::.|   :.:.|..|   .:||...|:..     ..:.....|.:|.|  
  Fly   131 ICEQNEQPQVKVPAQEKKL---RRSTKTTPTVFTSVKFADNSQATRTQWSRLTEDEVVALKRE-- 190

  Fly   319 SLSDSGDVVNSVPVYAIQANPGVPAPASSGVLVGTQTVPADLAHKIRH------KCPDCPKTFKT 377
              ....|.:      ..|.......|::..:            |.:||      .|..|.:.|.|
  Fly   191 --RRKRDCI------CEQCGRHFTCPSNFKL------------HLLRHTGVKSFACDQCSQQFYT 235

  Fly   378 PGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRI-HTGEKPFHCGYCEKSFSVK 441
            ...|..|:::|.|.|       .:.|.||..:::.::...||.|: ||..|||.|..|.|||::.
  Fly   236 ATLLRRHQELHAGNA-------LFQCRYCEATYSNASGRIQHERMRHTNVKPFTCKECNKSFAMS 293

  Fly   442 DYLTKHIRTHTGEKPYTCPYCDKRFTQRSALTVH 475
            ..|..|:.:|||.:.:.|..|...|.:||.||.|
  Fly   294 GKLRTHMLSHTGVRAFHCDSCQVSFVRRSHLTSH 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 36/113 (32%)
C2H2 Zn finger 368..388 CDD:275368 6/19 (32%)
C2H2 Zn finger 403..423 CDD:275368 6/20 (30%)
C2H2 Zn finger 431..451 CDD:275368 7/19 (37%)
zf-H2C2_2 443..468 CDD:316026 8/24 (33%)
C2H2 Zn finger 459..480 CDD:275368 8/17 (47%)
CG1792NP_651878.1 zf-AD 6..80 CDD:214871 14/73 (19%)
C2H2 Zn finger 198..218 CDD:275368 3/31 (10%)
C2H2 Zn finger 226..243 CDD:275368 5/16 (31%)
C2H2 Zn finger 254..275 CDD:275368 6/20 (30%)
zf-C2H2 281..303 CDD:278523 8/21 (38%)
C2H2 Zn finger 283..303 CDD:275368 7/19 (37%)
zf-H2C2_2 296..320 CDD:290200 8/23 (35%)
C2H2 Zn finger 311..329 CDD:275368 8/17 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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