Protein Alignment Cf2 and ranshi

DIOPT Version :10

• Sequence 1: NP_001350854.1
• Gene: Cf2 / 33692
• FlyBaseID: FBgn0000286
• Length: 537
• Species: Drosophila melanogaster
• Sequence 2: NP_649824.1
• Gene: ranshi / 41041
• FlyBaseID: FBgn0037620
• Length: 346
• Species: Drosophila melanogaster
• Alignment Length: 284
• Identity: 72/284 - (25%)
• Similarity: 120/284 - (42%)
• Gaps: 63/284 - (22%)

  Fly   238 QQQHQQQQQQQQQQQELLEQQQRE----MQEQAQQQQVHHHQQDQDLAGDQVALKVPPLTVKLNK 298
            ||....:::..:.|:|||..|..|    :.:::.:..:...:.:.|||  :::::|..|     .
  Fly    60 QQAISFRERCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLA--EISIEVERL-----D 117

  Fly   299 NANGGAIVS---------HPQVIIKEEPLSLSDSGDVVNSVPVYAI-------QANPGVPAPASS 347
            :.|.|.|.|         :...|.::||   ::..|:..|...|.|       .|...:.:.:.:
  Fly   118 DLNEGPIQSSGFKVEDILNESKINEDEP---NNEDDIDYSEMDYLIYESDTEVDAKQELKSDSEN 179

  Fly   348 GVLVGTQTVPAD--------------------LAHKIRHK------CPDCPKTFKTPGTLAMHRK 386
            ......:..|.|                    :.|..||:      |..|...|.||..|..|.:
  Fly   180 PKKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIR 244

  Fly   387 IHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTH 451
            .|||       |:|:.|.:|.:||:..:|..:|.|.||.|:||.|..|..:|:....|..|:..|
  Fly   245 KHTG-------EKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVH 302

  Fly   452 TGEKPYTCPYCDKRFTQRSALTVH 475
            ||||.:.|..|||.|::.:.||.|
  Fly   303 TGEKAFRCDLCDKLFSRYTHLTTH 326

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cf2	NP_001350854.1	COG5048	<366..>473	CDD:227381	40/112 (36%)
		C2H2 Zn finger	368..388	CDD:275368	7/19 (37%)
		C2H2 Zn finger	403..423	CDD:275368	7/19 (37%)
		C2H2 Zn finger	431..451	CDD:275368	5/19 (26%)
		zf-H2C2_2	443..468	CDD:463886	12/24 (50%)
		C2H2 Zn finger	459..480	CDD:275368	8/17 (47%)
ranshi	NP_649824.1	zf-AD	5..76	CDD:462262	3/15 (20%)
		C2H2 Zn finger	198..218	CDD:275368	1/19 (5%)
		COG5048	222..>276	CDD:227381	20/60 (33%)
		C2H2 Zn finger	226..246	CDD:275368	7/19 (37%)
		zf-H2C2_2	238..262	CDD:463886	10/30 (33%)
		C2H2 Zn finger	254..274	CDD:275368	7/19 (37%)
		C2H2 Zn finger	282..302	CDD:275368	5/19 (26%)
		zf-H2C2_2	295..319	CDD:463886	12/23 (52%)
		C2H2 Zn finger	310..328	CDD:275368	8/17 (47%)