DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and CG12605

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster


Alignment Length:276 Identity:76/276 - (27%)
Similarity:118/276 - (42%) Gaps:47/276 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 LTPEEQHHQQQL------QAEHHHQQQHQQQQQQQQQQQELLEQQQREMQEQAQQQQVHH-HQQD 277
            |||....|...:      .:|...||..:...||.||:...|:.....:..:.:..:... .:||
  Fly   322 LTPPNSDHSSDVDIDMSSSSESGLQQWGKPNPQQNQQRASALKMCLNMLDGRTKASKAAAVTKQD 386

  Fly   278 QDLAGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEP---LSLSDSGDVVNSVPVYAIQANP 339
            :     |..::..|.:.:.|.::.||.....|     |.|   |..|.||:..|    || :...
  Fly   387 R-----QEPMQPRPKSAQSNASSGGGPPSEPP-----ENPAASLGHSSSGNGEN----YA-KRKR 436

  Fly   340 GVPAPASSGVLVGTQTVPADLA-HKIRH---------KCPDCPKTFKTPGTLAMHRKIHTGEADA 394
            |.......|....|.   ::|: ||..|         ||..|.|.:.:...||||...|      
  Fly   437 GCYKCCECGKQYATS---SNLSRHKQTHRSLDSQSAKKCNTCGKAYVSMPALAMHLLTH------ 492

  Fly   395 TPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTC 459
               :..::|..|||.|::...|:.|.|.||||||:.|.:|.|:|:.:..|..|::||:|:|.:.|
  Fly   493 ---KLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFADRSNLRAHMQTHSGDKNFKC 554

  Fly   460 PYCDKRFTQRSALTVH 475
            ..|:|.|..:|.|..|
  Fly   555 HRCNKTFALKSYLNKH 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 39/115 (34%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
C2H2 Zn finger 403..423 CDD:275368 8/19 (42%)
C2H2 Zn finger 431..451 CDD:275368 6/19 (32%)
zf-H2C2_2 443..468 CDD:463886 10/24 (42%)
C2H2 Zn finger 459..480 CDD:275368 7/17 (41%)
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 72/265 (27%)
zf-C2H2 439..461 CDD:395048 5/24 (21%)
C2H2 Zn finger 441..461 CDD:275370 5/22 (23%)
C2H2 Zn finger 472..492 CDD:275368 7/19 (37%)
zf-C2H2 496..518 CDD:395048 8/21 (38%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
zf-H2C2_2 511..534 CDD:463886 12/22 (55%)
zf-C2H2 524..546 CDD:395048 6/21 (29%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
zf-H2C2_2 538..562 CDD:463886 9/23 (39%)
C2H2 Zn finger 554..571 CDD:275368 7/17 (41%)

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