DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and Kah

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster


Alignment Length:196 Identity:66/196 - (33%)
Similarity:89/196 - (45%) Gaps:33/196 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 HKCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPY----------------------TCSYCGK 408
            |.||:|.|.:.|...||.||:.|....|...:..||                      .|.:|||
  Fly   119 HICPECGKKYSTSSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCECQFCGK 183

  Fly   409 SFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSALT 473
            .|::...|:.|.|.|||||||.||.|||:|:.|..|..||:||:..||:||..|.|.|..:|.|.
  Fly   184 RFSRPWLLQGHIRTHTGEKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFALKSYLY 248

  Fly   474 VH--TTKLHPLXGRPGGGRQLPVPAPAAPPPPTHPPNPSGPGAPPPLSADTDTDPKKPSAAAAAS 536
            .|  ::.:....|.||.|      |.:...||:.|...........:||   ..|..|:||..|:
  Fly   249 KHEESSCMKNRGGVPGSG------AASGNRPPSSPKRQQAEVTSGTISA---LAPGSPAAAVCAA 304

  Fly   537 A 537
            :
  Fly   305 S 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 49/128 (38%)
C2H2 Zn finger 368..388 CDD:275368 9/19 (47%)
C2H2 Zn finger 403..423 CDD:275368 8/19 (42%)
C2H2 Zn finger 431..451 CDD:275368 10/19 (53%)
zf-H2C2_2 443..468 CDD:463886 12/24 (50%)
C2H2 Zn finger 459..480 CDD:275368 7/22 (32%)
KahNP_612040.1 C2H2 Zn finger 121..141 CDD:275368 9/19 (47%)
zf-C2H2 176..198 CDD:395048 8/21 (38%)
C2H2 Zn finger 178..198 CDD:275368 8/19 (42%)
zf-H2C2_2 191..214 CDD:463886 15/22 (68%)
zf-C2H2 204..226 CDD:395048 11/21 (52%)
C2H2 Zn finger 206..226 CDD:275368 10/19 (53%)
C2H2 Zn finger 234..250 CDD:275368 6/15 (40%)

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