DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cf2 and CG11906

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_611402.2 Gene:CG11906 / 37209 FlyBaseID:FBgn0034425 Length:634 Species:Drosophila melanogaster


Alignment Length:523 Identity:103/523 - (19%)
Similarity:169/523 - (32%) Gaps:135/523 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QRLPRPEDQ---------SPAPPPPPPSSATTSTA---APATPTHQVATV-------IANMDTLK 56
            |||.|...:         ||:...||.:.|..||.   :.....|...:|       :..:...:
  Fly   111 QRLQRSGGETTKVTTTTTSPSQHSPPIADAEVSTTLIESQEEVAHSGQSVRSRSSCSVLEVYLAQ 175

  Fly    57 TAFLPNLSMDPNVHV------SPHYCPMCHQQFERPQHVADHMQLCHGI-------------TLN 102
            ..:.|:.......|.      :...|..|.:.:.|..:.|.|::.|...             .||
  Fly   176 QPYSPSAKETEEKHAEGWKWRTRLECHECGRAYFRRDYYAQHLRRCSKTRRKQPRPSRVKCRVLN 240

  Fly   103 AQGAIATLDGGHPQAQQHPKLSHPCFNCDEKFGNAVDLDEHHRLAHQT--PAFLSRCLMCSIYGI 165
            .    |:.|...|.........:.|.:||.:|...:...:|.|:.||.  |     |.:|.    
  Fly   241 E----ASYDEEAPSRAIRSSRIYYCRHCDAEFETLISKRQHERMKHQQRYP-----CDLCE---- 292

  Fly   166 HSATQQPNEYKCTQCGSICTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQ 230
               .|...:|:.....:||.....|.   ..:|||||..|      .|..|    .|.....:.:
  Fly   293 ---AQLDTKYEWEMHHTICQAKQEAL---AIVEQQEAGQT------VMTSR----VPRACSMRSR 341

  Fly   231 LQAEHHHQQQHQQQQQQQQQQQELLEQQQREMQEQAQQQQVHHHQQDQDLAGDQVALKVPPLTVK 295
            .:|......::...::::.::.|.:|....|::|                 |::.|:....:   
  Fly   342 SRACSEAWDRYDMDEEEEDEEDEEIESGGEELEE-----------------GEEDAMYARRM--- 386

  Fly   296 LNKNANGGAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANPGVPAPASSGVLVGTQTVPAD- 359
               |..|..||:|          |.|:|....|...:|           ...|::....|...: 
  Fly   387 ---NFTGDWIVNH----------SRSNSNSAGNLSLLY-----------GDYGMVETHMTTDKEY 427

  Fly   360 -------LAHKIRHK---C--PDCPKTFKTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQ 412
                   |..::|.|   |  |||.....|...|..|..:...      |...:.|..||..||.
  Fly   428 DLYLLDLLKTQVRLKSFTCFTPDCGYQTDTLVALMKHDYMEHW------KMSWFYCHKCGDVFTS 486

  Fly   413 SNTLKQHTRIHTGEKPFH-CGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSALTVHT 476
            ...|..|  :|...:..: |..|.:.|.::..|.:|.:.|.....|.|.:|...|...:.|..|.
  Fly   487 KVFLDYH--MHLQNRGLYICHKCREEFELQHQLDRHFQLHRKGINYHCNFCRLEFLSEAKLLAHC 549

  Fly   477 TKL 479
            .||
  Fly   550 KKL 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 27/112 (24%)
C2H2 Zn finger 368..388 CDD:275368 7/21 (33%)
C2H2 Zn finger 403..423 CDD:275368 7/19 (37%)
C2H2 Zn finger 431..451 CDD:275368 5/19 (26%)
zf-H2C2_2 443..468 CDD:316026 7/24 (29%)
C2H2 Zn finger 459..480 CDD:275368 7/21 (33%)
CG11906NP_611402.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468401
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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