DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and Zfp280d

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001101635.2 Gene:Zfp280d / 315798 RGDID:1560796 Length:969 Species:Rattus norvegicus


Alignment Length:684 Identity:128/684 - (18%)
Similarity:203/684 - (29%) Gaps:220/684 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 STTNPQEQRLPRPEDQSPAPPPPPPSSATTSTAAPATPTHQV-----ATVIANMDTLKTAFLPNL 63
            |:.||::   |:|.:....   ...||..:|..:|:..:.||     ....:|.....|.|    
  Rat   184 SSVNPKK---PKPNENISG---TDASSVVSSEKSPSVMSLQVVPSQGTNCSSNQSKNGTTF---- 238

  Fly    64 SMDPNVHVSPHYCPMCHQQFERPQHVADHMQLC--------HGIT----LNAQGAIATLDG---- 112
                     |..||.|:..|.....:.:||..|        .|:|    ||:.....|||.    
  Rat   239 ---------PRACPKCNIHFNLLDPLKNHMTYCCPDMINNFLGLTKTDNLNSANEAKTLDSEKGK 294

  Fly   113 --------------GHPQAQQHPKLSHPCFNCDEKFGNAVDLDEH--HRL-----------AHQT 150
                          |..|.:|....:..||:|.:...|.:....|  |.|           .|.|
  Rat   295 LIMLVNDFYYGKYEGDVQEEQKTHTTFKCFSCLKVLKNNIRFMNHMKHHLELEKQSSESWEKHTT 359

  Fly   151 PAFLSRC---------LMCSIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQGFMEQQEAAVTP 206
               ...|         |.|.|...|:    |:|:     .:||....|:...:..:.|.    ..
  Rat   360 ---CQHCYRQFPTPFQLQCHIESTHT----PHEF-----STICKICELSFETEQILLQH----MK 408

  Fly   207 DDQLPAMAP--------RDMRLTPEEQHHQQQLQAEH----------------------HHQQQH 241
            |:..|...|        |....:..|.|    .:..|                      ||..:|
  Rat   409 DNHKPGEMPYICQVCNYRSSLFSEVESH----FRTSHENTKNLLCPFCLKVIKIATPYMHHYMKH 469

  Fly   242 QQQQQQQQQQQELLEQQQREMQEQAQQQQVHHH-----QQDQDL-AGDQVALK--VPPLTVKLNK 298
            |::...:..:..|   |....:|:...:..||.     :|.:.| .|.:|.::  |.||      
  Rat   470 QKKGIHRCTKCRL---QFLTCKEKMDHKTQHHRTFVKPKQLEGLPPGTKVTIRASVAPL------ 525

  Fly   299 NANGGAIVSHPQVIIKEEPLSLS----DSGDVVNSVPVYAIQANPGVPAPASSGVLV--GTQTVP 357
              ..|:.|: |.:......|.||    ::....|.|.:.....|..:..|:.:..:.  |:::  
  Rat   526 --QSGSSVT-PSISASTSTLQLSPPRTENVTAKNHVKLNTSTPNTTISDPSKTNEIKSNGSKS-- 585

  Fly   358 ADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRI 422
                 |.|.|..:..|...|........|::|...:...:...:.|..|.   ::......|...
  Rat   586 -----KNRSKVSNMQKKQSTLSNSNKKSKVNTALRNLRLRRGVHECIECS---SEVKDFANHFPT 642

  Fly   423 HTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKP------------------YTCPYC------- 462
            :.     ||.:|..:.|.......|:.:....:|                  ..|..|       
  Rat   643 YV-----HCSFCRYNTSCSKAYVNHMMSFHSNRPSKRYCIFKKHSENLRGISLVCLNCDFLTDVS 702

  Fly   463 --DKRFTQRSALTVHTTKL--------HPLXGRPGGGRQLPVPAP------AAPPPPTHPPNPSG 511
              |...|..|....||.::        .|...|..   :|...||      .:.....|......
  Rat   703 GLDNMATHLSQHETHTCQVLVEKVSVCIPTSERLS---ELKTEAPTKGQESVSKETARHSTAERE 764

  Fly   512 PGA---------PPPLSADTDTDPKKPSAAAAAS 536
            |||         .||...||..|.....|||||:
  Rat   765 PGASHSESKQDKAPPSEDDTGRDASVCEAAAAAN 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 19/133 (14%)
C2H2 Zn finger 368..388 CDD:275368 3/19 (16%)
C2H2 Zn finger 403..423 CDD:275368 3/19 (16%)
C2H2 Zn finger 431..451 CDD:275368 4/19 (21%)
zf-H2C2_2 443..468 CDD:463886 5/51 (10%)
C2H2 Zn finger 459..480 CDD:275368 7/37 (19%)
Zfp280dNP_001101635.2 DUF4195 45..229 CDD:463993 11/50 (22%)
C2H2 Zn finger 323..357 CDD:275371 7/33 (21%)
C2H2 Zn finger 360..381 CDD:275368 4/20 (20%)
C2H2 Zn finger 390..411 CDD:275368 4/24 (17%)
C2H2 Zn finger 420..439 CDD:275368 3/22 (14%)

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