DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and Zfp280b

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001406443.1 Gene:Zfp280b / 294343 RGDID:1565460 Length:532 Species:Rattus norvegicus


Alignment Length:217 Identity:59/217 - (27%)
Similarity:81/217 - (37%) Gaps:42/217 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 ALKVPPLTVKLNKNANGGAIVS---HPQVIIKEEPLSLSDSGDVVNSVPVYAIQANPGV--PAPA 345
            :|:.|.   .||...||..:..   ||:          .|||.|...   ::..|:|..  |...
  Rat   219 SLEAPK---SLNLFVNGAPLSGDPVHPR----------QDSGSVDTD---FSSLASPETFDPKKG 267

  Fly   346 SSGVLVGT--------QTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIH-----TGEADATPK 397
            |..:|:..        :..|....| ...|||.|.|..|.. ....|.|.|     .|..:|.  
  Rat   268 SLTLLLSDFYYGQYKGEGKPEQKTH-TTFKCPSCSKALKNV-KFMNHTKHHLELERQGSDEAW-- 328

  Fly   398 ERPYTCSYCGKSFTQSNTLKQH-TRIHTGEKP-FHCGYCEKSFSVKDYLTKHIRTH--TGEKPYT 458
            |...||..|.:.|.....|:.| .|:||...| ..|..||.||..:..|.:|::.:  .||.||.
  Rat   329 ESHTTCLRCHRLFASPFQLECHIDRVHTAPDPCVVCKICELSFETEQVLLEHMKDNHKPGEMPYV 393

  Fly   459 CPYCDKRFTQRSALTVHTTKLH 480
            |..|..|.:..:.:..|.||.|
  Rat   394 CQVCKYRSSVFADVETHFTKCH 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 36/115 (31%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
C2H2 Zn finger 403..423 CDD:275368 6/20 (30%)
C2H2 Zn finger 431..451 CDD:275368 7/19 (37%)
zf-H2C2_2 443..468 CDD:463886 9/26 (35%)
C2H2 Zn finger 459..480 CDD:275368 6/20 (30%)
Zfp280bNP_001406443.1 DUF4195 52..219 CDD:463993 59/217 (27%)
C2H2 Zn finger 334..355 CDD:275368 6/20 (30%)
C2H2 Zn finger 364..385 CDD:275368 7/20 (35%)

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