DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cf2 and Zbtb38

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_036010907.1 Gene:Zbtb38 / 245007 MGIID:2442866 Length:1243 Species:Mus musculus


Alignment Length:225 Identity:61/225 - (27%)
Similarity:94/225 - (41%) Gaps:41/225 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 QQQREM------QEQAQQQQVHHHQQDQDLAGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKE 315
            :|.|:|      :|:..:..|...:...:|  |:..:|:||                       :
Mouse   972 KQLRKMRKVKWRKERRSRSPVGRCRYPAEL--DRAEVKLPP-----------------------D 1011

  Fly   316 EPLSLSDSGDVVNSVPVYAIQANPGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGT 380
            :.....:..:....:|....:...|.|..|:.   .|.:..|........:.|..|.|.|::..|
Mouse  1012 KAFEEEEEEEENKEMPKLQCELCDGCPDGAAG---AGAEGKPHQHLTSKPYICELCAKQFQSSST 1073

  Fly   381 LAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLT 445
            |.||.:.|||       |:||.|..||:.|:....|::|.|||.|.|.|.|.||.|:|::.:.|.
Mouse  1074 LKMHMRCHTG-------EKPYQCKTCGRCFSVQGNLQKHERIHLGVKEFICQYCNKAFTLNETLK 1131

  Fly   446 KHIRTHTGEKPYTCPYCDKRFTQRSALTVH 475
            .|.|.|||||.|.|.:|.:.|...|....|
Mouse  1132 IHERIHTGEKRYHCQFCFQGFLYLSTKRNH 1161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 44/106 (42%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
C2H2 Zn finger 403..423 CDD:275368 7/19 (37%)
C2H2 Zn finger 431..451 CDD:275368 8/19 (42%)
zf-H2C2_2 443..468 CDD:316026 12/24 (50%)
C2H2 Zn finger 459..480 CDD:275368 5/17 (29%)
Zbtb38XP_036010907.1 BTB_POZ_ZBTB38_CIBZ 61..174 CDD:349532
zf-C2H2_8 <386..446 CDD:406359
C2H2 Zn finger 388..408 CDD:275368
C2H2 Zn finger 417..436 CDD:275368
C2H2 Zn finger 506..526 CDD:275368
C2H2 Zn finger 534..554 CDD:275368
C2H2 Zn finger 562..580 CDD:275368
C2H2 Zn finger 1061..1081 CDD:275368 8/19 (42%)
zf-H2C2_2 1074..1097 CDD:404364 12/29 (41%)
zf-C2H2 1087..1109 CDD:395048 8/21 (38%)
C2H2 Zn finger 1089..1109 CDD:275368 7/19 (37%)
C2H2 Zn finger 1117..1137 CDD:275368 8/19 (42%)
C2H2 Zn finger 1145..1165 CDD:275368 5/17 (29%)
C2H2 Zn finger 1176..1196 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.