DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and Zfp143

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001361547.1 Gene:Zfp143 / 20841 MGIID:1277969 Length:638 Species:Mus musculus


Alignment Length:475 Identity:113/475 - (23%)
Similarity:164/475 - (34%) Gaps:171/475 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 QHV------------ADHMQLCHGITLNA---------------------QGAIATLDGGHPQAQ 118
            |||            .|:::...|::|.|                     .|.:..|:.|.....
Mouse    24 QHVTLCLTEAVTVADGDNLENMEGVSLQAVTLADGSTAYIQHNSKDGRLIDGQVIQLEDGSAAYV 88

  Fly   119 QH---PKLSHPCFNCDEKFGNAVDLDE------HH--------------RLAHQTPAFLSRCLMC 160
            ||   ||.:......::  |.||.|::      ||              :|...|.|:       
Mouse    89 QHVPIPKSTGDSLRLED--GQAVQLEDGTTAFIHHTSKDSYDQSSLQAVQLEDGTTAY------- 144

  Fly   161 SIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQGFMEQQEAAVTPD-----DQLPAMAPRD--- 217
                ||.|.|.|.        |....|:.|.|....:...:|.:.||     :|..|....|   
Mouse   145 ----IHHAVQVPQ--------SDTILAIQADGTVAGLHTGDATIDPDTISALEQYAAKVSIDGSD 197

  Fly   218 -----MRLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQQQELLEQQQREMQEQAQQQQVHH--HQ 275
                 ..:...||..:.|:..:.|..:...:.||..::..........::...|...:||.  |.
Mouse   198 GVTSTGMIGENEQEKKMQIVLQGHATRVTPKSQQSGEKAFRCKYDGCGKLYTTAHHLKVHERSHT 262

  Fly   276 QDQ----DLAGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQ 336
            .|:    :.:|...|.            |.|..:.||.:....|:|...|:.             
Mouse   263 GDRPYQCEHSGCGKAF------------ATGYGLKSHFRTHTGEKPYRCSED------------- 302

  Fly   337 ANPGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPY 401
                                             :|.|:|||.|.|..|.:.|||       |||:
Mouse   303 ---------------------------------NCTKSFKTSGDLQKHIRTHTG-------ERPF 327

  Fly   402 TCSY--CGKSFTQSNTLKQHTRIHTGEKPFHCGY--CEKSFSVKDYLTKHIRTHTGEKPYTC--P 460
            .|..  ||:|||.||..|.|.|.||||:|::|..  |.::|:.......|:|.|||||||.|  |
Mouse   328 KCPIEGCGRSFTTSNIRKVHIRTHTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVP 392

  Fly   461 YCDKRFTQRSAL----TVHT 476
            .||||||:.|:|    .|||
Mouse   393 GCDKRFTEYSSLYKHHVVHT 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 52/116 (45%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
C2H2 Zn finger 403..423 CDD:275368 11/21 (52%)
C2H2 Zn finger 431..451 CDD:275368 5/21 (24%)
zf-H2C2_2 443..468 CDD:463886 16/26 (62%)
C2H2 Zn finger 459..480 CDD:275368 13/24 (54%)
Zfp143NP_001361547.1 SFP1 <207..292 CDD:227516 17/96 (18%)
C2H2 Zn finger 239..261 CDD:275368 3/21 (14%)
COG5048 <251..424 CDD:227381 69/227 (30%)
C2H2 Zn finger 269..291 CDD:275368 6/33 (18%)
C2H2 Zn finger 299..321 CDD:275368 9/67 (13%)
C2H2 Zn finger 329..351 CDD:275368 11/21 (52%)
C2H2 Zn finger 359..381 CDD:275368 5/21 (24%)
C2H2 Zn finger 389..411 CDD:275368 10/21 (48%)
C2H2 Zn finger 419..438 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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