DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and hbl-1

DIOPT Version :9

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001041243.1 Gene:hbl-1 / 180848 WormBaseID:WBGene00001824 Length:982 Species:Caenorhabditis elegans


Alignment Length:610 Identity:119/610 - (19%)
Similarity:190/610 - (31%) Gaps:188/610 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 STTNPQEQRLPRPEDQSPAPP--------------------------PPPPSSATTSTAA--PAT 40
            ||..|::|..|:.|:.|.:.|                          |..||....|..|  |.|
 Worm   155 STIKPEDQATPKLEEGSDSKPESTSVEGTSSNYQVTSEPVQMPQMPIPVIPSFLKNSLPAPIPIT 219

  Fly    41 PTHQVATVIANMDTLKTAFLPNLSMDPNVHVSPHYCPMCHQQFERPQHVADHMQLCHGITLNAQ- 104
            ||.......:|..:::.|.|..||               .|||......|..::.....::..| 
 Worm   220 PTQSANVERSNSPSIEEALLLTLS---------------QQQFAEVFAEAAKIRKSSSESIGFQR 269

  Fly   105 -GAIATLDGGHPQAQQHPK---LSHPCFNCDEKFGNAVDLDEHHRLAHQTPAFLSRCLMCSIYGI 165
             |..|.|:       ..||   :|....|.:|...:.|.       |..||...:....|...|:
 Worm   270 SGTSAFLN-------IEPKEMSMSSANNNNEEAPASTVS-------ACSTPTTTTSASFCRPPGL 320

  Fly   166 HSATQQPNEYKCTQCGSICTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQ 230
            ......|     ||.|.   |.||.....|||                       .|.:.|....
 Worm   321 GPVALPP-----TQNGQ---TPMLVCPICGFM-----------------------CPSKFHFNSH 354

  Fly   231 LQAEHHHQ-------QQHQQQQQQQQQQQELLEQQQREMQEQAQQQQVHHHQQDQDLAGDQVALK 288
            :.....||       .:.:.:.::..::...:|:|.|...|....::.....::..|:.|..|  
 Worm   355 MNTHGDHQCSMCDYTSRTEGRLKKHMRESHTVEEQLRAGFESEPAKESASSPKNLSLSKDGSA-- 417

  Fly   289 VPPLTVKLNKNANGGAIVSHPQVIIK-----EEPLSLSDSGDVVNSVP----------------- 331
            ..|:....|.:....:|:......:.     |:|.:||.....::|.|                 
 Worm   418 TSPINEIFNLSTTMASILDSTNNAVSSTSTTEQPSALSALTLDMSSTPSLLSTLAHSSFGVSALD 482

  Fly   332 -VYAIQANP------GVPAPASSGVLVGTQTVPADL---------------AHKIR-HKCPDCPK 373
             :.||..||      |:...::.||:  :..:..|.               :.||: .||..|..
 Worm   483 QIKAISENPSFMPEGGINLASALGVV--SNAIKGDTPSPEKQSNGECRRSSSGKIKIFKCKQCGH 545

  Fly   374 TFKTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSF 438
            ...:......|.:.|      .|.|:...|.:|.......:.|:.|.|.|.|.|||.|..|..:.
 Worm   546 QSLSKDDQWAHARTH------IPAEKQLNCQHCNFVTEYKHHLEYHYRNHIGSKPFQCKKCAYNC 604

  Fly   439 SVKDYLTKHIRTHTGEKPYTC-------PYCDKRFTQRSALTVHTTKLHPLXGRPGGGRQLPVPA 496
            ..|..|..|:::||....:.|       .||            |:.|||.   :....|::|   
 Worm   605 VNKSMLNSHMKSHTNHYQFRCMDCTYATKYC------------HSLKLHL---KKYNHRRVP--- 651

  Fly   497 PAAPPPPTHPPNPSGPGAPPPLSAD 521
                    .....||..:.||.::|
 Worm   652 --------EGIEMSGGDSSPPFTSD 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 27/113 (24%)
C2H2 Zn finger 368..388 CDD:275368 3/19 (16%)
C2H2 Zn finger 403..423 CDD:275368 5/19 (26%)
C2H2 Zn finger 431..451 CDD:275368 5/19 (26%)
zf-H2C2_2 443..468 CDD:316026 7/31 (23%)
C2H2 Zn finger 459..480 CDD:275368 5/27 (19%)
hbl-1NP_001041243.1 C2H2 Zn finger 338..358 CDD:275368 5/42 (12%)
C2H2 Zn finger 363..384 CDD:275368 0/20 (0%)
C2H2 Zn finger 569..589 CDD:275368 5/19 (26%)
zf-H2C2_2 581..602 CDD:290200 10/20 (50%)
C2H2 Zn finger 597..617 CDD:275368 5/19 (26%)
zf-H2C2_2 609..634 CDD:290200 5/24 (21%)
C2H2 Zn finger 625..643 CDD:275368 7/32 (22%)
C2H2 Zn finger 931..951 CDD:275368
C2H2 Zn finger 959..982 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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