DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and M03D4.4

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001023313.1 Gene:M03D4.4 / 177375 WormBaseID:WBGene00019751 Length:505 Species:Caenorhabditis elegans


Alignment Length:230 Identity:65/230 - (28%)
Similarity:101/230 - (43%) Gaps:51/230 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 LEQQQREMQEQAQQQQVHHHQQDQDLAGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEPLS 319
            |::.:||..|..:|......:.:.|  .|::|:                         ||   :.
 Worm    20 LQRHEREEHETVEQGDQEEDRMEDD--SDELAM-------------------------IK---IK 54

  Fly   320 LSDSGDVVNSVPVYAIQANPGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMH 384
            :.|| |.::......:..||..|:..||.            ..|.|::|.||.:.|.....||.|
 Worm    55 IEDS-DFLSDTDSSQLSMNPTTPSEKSSS------------GEKGRYECEDCHEMFAVKRELATH 106

  Fly   385 RKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIR 449
            .:||:|       |:|::|:.|||.|.....||:|...||||:...|.:|.|:|..|.:||:|:.
 Worm   107 MRIHSG-------EQPHSCTQCGKEFGTRQLLKKHWMWHTGERSHVCPHCNKAFFQKGHLTQHLM 164

  Fly   450 THTGEKPYTCPYCDKRFTQRSALTVHTTKLHPLXG 484
            .|:|.:|:.||.|.|.|..:..|..| .|:|.. |
 Worm   165 IHSGGRPHECPQCHKTFIFKFDLNRH-MKIHQERG 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 40/106 (38%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
C2H2 Zn finger 403..423 CDD:275368 8/19 (42%)
C2H2 Zn finger 431..451 CDD:275368 8/19 (42%)
zf-H2C2_2 443..468 CDD:463886 11/24 (46%)
C2H2 Zn finger 459..480 CDD:275368 8/20 (40%)
M03D4.4NP_001023313.1 C2H2 Zn finger 90..110 CDD:275368 7/19 (37%)
zf-H2C2_2 102..125 CDD:463886 12/29 (41%)
C2H2 Zn finger 118..138 CDD:275368 8/19 (42%)
C2H2 Zn finger 146..166 CDD:275368 8/19 (42%)
zf-H2C2_2 158..181 CDD:463886 10/22 (45%)
zf-C2H2 172..194 CDD:395048 8/22 (36%)
C2H2 Zn finger 174..194 CDD:275368 8/20 (40%)

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