DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cf2 and LOC1280086

DIOPT Version :10

Sequence 1:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_319888.4 Gene:LOC1280086 / 1280086 VectorBaseID:AGAMI1_002537 Length:422 Species:Anopheles gambiae


Alignment Length:199 Identity:60/199 - (30%)
Similarity:88/199 - (44%) Gaps:39/199 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 VKLNKNANGGAIVSHPQVIIKEEPLSLSD----------SGD-------VVNSVPVYAIQANPGV 341
            ::|.:..|||:.:|:...:.||   :::|          .||       ..||...|.::    :
Mosquito    76 MRLRQYMNGGSAMSYSYTLDKE---TMTDDSWLLSGMDHKGDDQKSPEKKTNSKKRYRVK----L 133

  Fly   342 PAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADATPKERPYTCSYC 406
            |......   |.:.:|     ||...|..|.|:||....|.||.:.|:|       |:||.|:.|
Mosquito   134 PEERKKR---GPKPMP-----KIPQTCYQCHKSFKCAAQLQMHLRTHSG-------EKPYACNLC 183

  Fly   407 GKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSA 471
            .:.|.|.:.|..|.|.||||:|:.|..|.|.||.......|.:.||.|:.:.||.|:|.|.....
Mosquito   184 PRRFAQKHNLAIHLRTHTGERPYQCEICSKQFSALGNFQAHKKIHTNERDHVCPSCNKGFITSGD 248

  Fly   472 LTVH 475
            ||.|
Mosquito   249 LTRH 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 39/106 (37%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
C2H2 Zn finger 403..423 CDD:275368 7/19 (37%)
C2H2 Zn finger 431..451 CDD:275368 6/19 (32%)
zf-H2C2_2 443..468 CDD:463886 9/24 (38%)
C2H2 Zn finger 459..480 CDD:275368 8/17 (47%)
LOC1280086XP_319888.4 None

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